BLASTX nr result

ID: Coptis21_contig00039319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039319
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787...    58   7e-07
emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]    58   7e-07
ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264...    57   2e-06

>ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787629 [Glycine max]
          Length = 470

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/87 (33%), Positives = 49/87 (56%)
 Frame = -1

Query: 268 CRWEKTEAPLHVLNTDGTLQGDLGGWAAVIRNYKGEVIVARKGKSEYGSIAMIELQGLEK 89
           C W K E     LNTDG++  +   +  ++R+Y+GE I A   K+  G + + EL  + +
Sbjct: 306 CEWTKPEFGWTKLNTDGSIHSNTVSFGGLLRDYRGEPICAFVSKAPQGDVFLAELWAIWR 365

Query: 88  GLEMASHQGIQRIEARTDSMNVISFMN 8
           GL ++   GI+ I   +DSM+V+  +N
Sbjct: 366 GLVLSLGLGIKAIWVESDSMSVVRTVN 392


>emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]
          Length = 318

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/85 (35%), Positives = 48/85 (56%)
 Frame = -1

Query: 262 WEKTEAPLHVLNTDGTLQGDLGGWAAVIRNYKGEVIVARKGKSEYGSIAMIELQGLEKGL 83
           WEK E     LNTDG++     G+  + R++ G+ I A   K+    I ++EL  + +GL
Sbjct: 155 WEKPEFGWTKLNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWRGL 214

Query: 82  EMASHQGIQRIEARTDSMNVISFMN 8
            +AS  GI+ I   +DSM+V+  +N
Sbjct: 215 VLASGLGIKAIWVESDSMSVVKTIN 239


>ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264337 [Vitis vinifera]
          Length = 431

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/85 (34%), Positives = 47/85 (55%)
 Frame = -1

Query: 262 WEKTEAPLHVLNTDGTLQGDLGGWAAVIRNYKGEVIVARKGKSEYGSIAMIELQGLEKGL 83
           WEK E     LNTDG++     G+  + R++ G+ I A   K+    I ++EL  + +GL
Sbjct: 268 WEKPEFGWTKLNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWRGL 327

Query: 82  EMASHQGIQRIEARTDSMNVISFMN 8
            +AS  GI+ I   +DSM+ +  +N
Sbjct: 328 VLASGLGIKAIWVESDSMSAVKTIN 352


Top