BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039304
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ00277.1| hypothetical protein [Lotus japonicus]                 98   4e-29
emb|CAJ00275.1| hypothetical protein [Lotus japonicus]                 98   4e-29
emb|CAJ00278.1| hypothetical protein [Lotus japonicus]                 98   8e-29
emb|CAJ00274.1| hypothetical protein [Lotus japonicus]                 98   8e-29
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    95   5e-28

>emb|CAJ00277.1| hypothetical protein [Lotus japonicus]
          Length = 1508

 Score = 97.8 bits (242), Expect(2) = 4e-29
 Identities = 43/65 (66%), Positives = 54/65 (83%)
 Frame = -1

Query: 224 PHIQKSEIEKKVKEMLKSGIMRPSKSPFTSPVLLVKKIDNSWRMCADYRKLNDMTVKNKY 45
           P  QK  I+K VKE+L+SG+++PS SPF SP++LVKK D SWRMC DYRKLNDMTVK K+
Sbjct: 606 PPAQKDVIDKMVKELLESGVIQPSSSPFASPIVLVKKKDGSWRMCVDYRKLNDMTVKAKF 665

Query: 44  PIPVI 30
           PIP++
Sbjct: 666 PIPLV 670



 Score = 55.5 bits (132), Expect(2) = 4e-29
 Identities = 26/41 (63%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
 Frame = -2

Query: 343 LDGYSDVFEEPKELPPERS-HEHYIHLKEGSGPINIRRYRY 224
           L  YSDVFEEP +LPP R  H+H I LKEGS P+++R YRY
Sbjct: 565 LQDYSDVFEEPAQLPPFRGIHDHKIILKEGSNPVSLRPYRY 605


>emb|CAJ00275.1| hypothetical protein [Lotus japonicus]
          Length = 1112

 Score = 97.8 bits (242), Expect(2) = 4e-29
 Identities = 43/65 (66%), Positives = 54/65 (83%)
 Frame = -1

Query: 224 PHIQKSEIEKKVKEMLKSGIMRPSKSPFTSPVLLVKKIDNSWRMCADYRKLNDMTVKNKY 45
           P  QK  I+K VKE+L+SG+++PS SPF SP++LVKK D SWRMC DYRKLNDMTVK K+
Sbjct: 606 PPAQKDVIDKMVKELLESGVIQPSSSPFASPIVLVKKKDGSWRMCVDYRKLNDMTVKAKF 665

Query: 44  PIPVI 30
           PIP++
Sbjct: 666 PIPLV 670



 Score = 55.5 bits (132), Expect(2) = 4e-29
 Identities = 26/41 (63%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
 Frame = -2

Query: 343 LDGYSDVFEEPKELPPERS-HEHYIHLKEGSGPINIRRYRY 224
           L  YSDVFEEP +LPP R  H+H I LKEGS P+++R YRY
Sbjct: 565 LQDYSDVFEEPAQLPPFRGIHDHKIILKEGSNPVSLRPYRY 605


>emb|CAJ00278.1| hypothetical protein [Lotus japonicus]
          Length = 1508

 Score = 97.8 bits (242), Expect(2) = 8e-29
 Identities = 43/65 (66%), Positives = 54/65 (83%)
 Frame = -1

Query: 224 PHIQKSEIEKKVKEMLKSGIMRPSKSPFTSPVLLVKKIDNSWRMCADYRKLNDMTVKNKY 45
           P  QK  I+K VKE+L+SG+++PS SPF SP++LVKK D SWRMC DYRKLNDMTVK K+
Sbjct: 606 PPAQKDVIDKMVKELLESGVIQPSSSPFASPIVLVKKKDGSWRMCVDYRKLNDMTVKAKF 665

Query: 44  PIPVI 30
           PIP++
Sbjct: 666 PIPLV 670



 Score = 54.3 bits (129), Expect(2) = 8e-29
 Identities = 25/41 (60%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
 Frame = -2

Query: 343 LDGYSDVFEEPKELPPERS-HEHYIHLKEGSGPINIRRYRY 224
           L  YSDVFEEP +LPP R  H+H I LK+GS P+++R YRY
Sbjct: 565 LQDYSDVFEEPAQLPPFRGIHDHKIILKDGSNPVSLRPYRY 605


>emb|CAJ00274.1| hypothetical protein [Lotus japonicus]
          Length = 1508

 Score = 97.8 bits (242), Expect(2) = 8e-29
 Identities = 43/65 (66%), Positives = 54/65 (83%)
 Frame = -1

Query: 224 PHIQKSEIEKKVKEMLKSGIMRPSKSPFTSPVLLVKKIDNSWRMCADYRKLNDMTVKNKY 45
           P  QK  I+K VKE+L+SG+++PS SPF SP++LVKK D SWRMC DYRKLNDMTVK K+
Sbjct: 606 PPAQKDVIDKMVKELLESGVIQPSSSPFASPIVLVKKKDGSWRMCVDYRKLNDMTVKAKF 665

Query: 44  PIPVI 30
           PIP++
Sbjct: 666 PIPLV 670



 Score = 54.3 bits (129), Expect(2) = 8e-29
 Identities = 25/41 (60%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
 Frame = -2

Query: 343 LDGYSDVFEEPKELPPERS-HEHYIHLKEGSGPINIRRYRY 224
           L  YSDVFEEP +LPP R  H+H I LK+GS P+++R YRY
Sbjct: 565 LQDYSDVFEEPAQLPPFRGIHDHKIILKDGSNPVSLRPYRY 605


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score = 95.1 bits (235), Expect(2) = 5e-28
 Identities = 46/74 (62%), Positives = 57/74 (77%)
 Frame = -1

Query: 224 PHIQKSEIEKKVKEMLKSGIMRPSKSPFTSPVLLVKKIDNSWRMCADYRKLNDMTVKNKY 45
           PH  K+EIEK+V+EML++GI+R S S F+SPV+LVK+ DNSWRMC DYR LN  TV +K+
Sbjct: 391 PHHHKNEIEKQVREMLQAGIIRHSTSSFSSPVILVKEKDNSWRMCIDYRALNKATVPDKF 450

Query: 44  PIPVIXXXXXXLHG 3
           PIPVI      LHG
Sbjct: 451 PIPVIEELLDELHG 464



 Score = 54.3 bits (129), Expect(2) = 5e-28
 Identities = 23/40 (57%), Positives = 28/40 (70%)
 Frame = -2

Query: 343 LDGYSDVFEEPKELPPERSHEHYIHLKEGSGPINIRRYRY 224
           L+ Y  VF+EP  LPP+R  EH I LKEG G +N+R YRY
Sbjct: 351 LENYGGVFQEPTGLPPKRKKEHVITLKEGEGAVNVRPYRY 390