BLASTX nr result

ID: Coptis21_contig00039301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039301
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318191.1| predicted protein [Populus trichocarpa] gi|2...   110   9e-23
ref|XP_002321770.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_002272899.1| PREDICTED: germin-like protein 11-1 [Vitis v...   103   1e-20
ref|XP_002511061.1| Rhicadhesin receptor precursor, putative [Ri...    94   1e-17
ref|XP_002449624.1| hypothetical protein SORBIDRAFT_05g020370 [S...    93   3e-17

>ref|XP_002318191.1| predicted protein [Populus trichocarpa] gi|222858864|gb|EEE96411.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score =  110 bits (276), Expect = 9e-23
 Identities = 55/98 (56%), Positives = 69/98 (70%)
 Frame = +2

Query: 5   MKVIVFLTVFLCYSCISVRNCLADDSPVSDMCPTNTPGQDIPFVNGFVCKNPSSVVASDF 184
           MK  +F  +FLC  CI++  CLAD   + D CPT T G    F+NGF CKNP+SVVASDF
Sbjct: 1   MKFTLFFCIFLC-PCITI--CLADSDNLQDTCPTATIGMQTVFINGFPCKNPNSVVASDF 57

Query: 185 KTSKLNHSGDTDSFLHSSMTVLTAVDFVGLNTLGIAFA 298
           K+SKL+H GDT +F  SS+T+  A DF GLNTLG++ A
Sbjct: 58  KSSKLSHPGDTGTFFRSSLTLDMAADFPGLNTLGLSIA 95


>ref|XP_002321770.1| predicted protein [Populus trichocarpa] gi|222868766|gb|EEF05897.1|
           predicted protein [Populus trichocarpa]
          Length = 200

 Score =  106 bits (265), Expect = 2e-21
 Identities = 52/93 (55%), Positives = 68/93 (73%)
 Frame = +2

Query: 20  FLTVFLCYSCISVRNCLADDSPVSDMCPTNTPGQDIPFVNGFVCKNPSSVVASDFKTSKL 199
           F  +FL  +CI++  CLAD   + D CPT T  +   F+NGF CKNP+S+VASDFK+SKL
Sbjct: 1   FFCIFLS-TCINI--CLADTDNLQDTCPTATTDKQTVFINGFPCKNPNSIVASDFKSSKL 57

Query: 200 NHSGDTDSFLHSSMTVLTAVDFVGLNTLGIAFA 298
           +  GDTD++LHSS+T  TA DF GLNTLG++ A
Sbjct: 58  SRPGDTDNYLHSSVTFNTAADFPGLNTLGLSIA 90


>ref|XP_002272899.1| PREDICTED: germin-like protein 11-1 [Vitis vinifera]
           gi|302143899|emb|CBI23004.3| unnamed protein product
           [Vitis vinifera]
          Length = 223

 Score =  103 bits (257), Expect = 1e-20
 Identities = 49/81 (60%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
 Frame = +2

Query: 59  RNCLADDSPVSDMCPTNTPGQD-IPFVNGFVCKNPSSVVASDFKTSKLNHSGDTDSFLHS 235
           R CLAD   + D CPT T GQ    F NG  CKNP++++ASDFKTSKLNH GDTD+F  S
Sbjct: 18  RICLADSDNLQDACPTATTGQQQTVFFNGLPCKNPTNIIASDFKTSKLNHGGDTDNFFRS 77

Query: 236 SMTVLTAVDFVGLNTLGIAFA 298
           S T++TA DF GLNTLG++ A
Sbjct: 78  STTLITAADFPGLNTLGLSIA 98


>ref|XP_002511061.1| Rhicadhesin receptor precursor, putative [Ricinus communis]
           gi|223550176|gb|EEF51663.1| Rhicadhesin receptor
           precursor, putative [Ricinus communis]
          Length = 218

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 42/90 (46%), Positives = 59/90 (65%)
 Frame = +2

Query: 29  VFLCYSCISVRNCLADDSPVSDMCPTNTPGQDIPFVNGFVCKNPSSVVASDFKTSKLNHS 208
           +F    C +++ C AD   V D+CP     +   F+NG  CK P S+  SDFK+SKL+  
Sbjct: 6   LFCIVLCSAIQMCFADCDNVQDICPAAPTSKQNIFINGLPCKRPESIAPSDFKSSKLSQP 65

Query: 209 GDTDSFLHSSMTVLTAVDFVGLNTLGIAFA 298
           GDTD+FL SS T++TA+DF GLNTLG++ +
Sbjct: 66  GDTDNFLRSSTTIVTAIDFPGLNTLGLSIS 95


>ref|XP_002449624.1| hypothetical protein SORBIDRAFT_05g020370 [Sorghum bicolor]
           gi|241935467|gb|EES08612.1| hypothetical protein
           SORBIDRAFT_05g020370 [Sorghum bicolor]
          Length = 223

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 44/99 (44%), Positives = 68/99 (68%), Gaps = 1/99 (1%)
 Frame = +2

Query: 5   MKVIVFLTVFLCYSCI-SVRNCLADDSPVSDMCPTNTPGQDIPFVNGFVCKNPSSVVASD 181
           MK+   L  ++    + +V   L+D+ P+ D+CP    G+   F+NGF+CK+PS+++ASD
Sbjct: 1   MKIFTHLCSYILLLVVFNVPKGLSDNPPLQDVCPMAPQGERKLFMNGFLCKHPSTILASD 60

Query: 182 FKTSKLNHSGDTDSFLHSSMTVLTAVDFVGLNTLGIAFA 298
           FKT  LNH+GD D+ + SS+ V+TA +F GLNTLG++ A
Sbjct: 61  FKTLLLNHAGDLDNIVRSSVNVVTATEFPGLNTLGLSMA 99


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