BLASTX nr result

ID: Coptis21_contig00039294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039294
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517535.1| PREDICTED: uncharacterized protein LOC100785...    97   1e-18
ref|XP_003537924.1| PREDICTED: uncharacterized protein LOC100819...    96   2e-18
ref|XP_003610880.1| Beta-1,3-glucosyltransferase [Medicago trunc...    96   4e-18
ref|XP_002270850.1| PREDICTED: uncharacterized protein LOC100253...    91   8e-17
ref|NP_174595.1| fringe-related protein [Arabidopsis thaliana] g...    89   3e-16

>ref|XP_003517535.1| PREDICTED: uncharacterized protein LOC100785910 [Glycine max]
          Length = 545

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 53/119 (44%), Positives = 61/119 (51%), Gaps = 25/119 (21%)
 Frame = +1

Query: 4   VLTLLFSTTAWLSLVFSGTTTRCWHRLKDXXXXXXXXXXXXXXXXXXXXXXXXX------ 165
           +  LL STTAWLSLVFS  TT C+H LKD                               
Sbjct: 54  IAALLISTTAWLSLVFSDATTCCFHHLKDWESSPHFFNWKKCISHRLAKVTPPPALQYET 113

Query: 166 -------------------EQIVFGIAGSSQLWKRRKEFVRLWWRPDDMRGHLWLEEQL 285
                              + IVFGIAGSSQLWKRRKE+V+LWWRP+DMRGH+WLEEQ+
Sbjct: 114 VNAHLHNGSRTVEQEGLSLKHIVFGIAGSSQLWKRRKEYVKLWWRPNDMRGHVWLEEQV 172


>ref|XP_003537924.1| PREDICTED: uncharacterized protein LOC100819814 [Glycine max]
          Length = 545

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 52/119 (43%), Positives = 61/119 (51%), Gaps = 25/119 (21%)
 Frame = +1

Query: 4   VLTLLFSTTAWLSLVFSGTTTRCWHRLKDXXXXXXXXXXXXXXXXXXXXXXXXX------ 165
           +  LL STTAWLS+VFS  TT C+H LKD                               
Sbjct: 54  IAALLISTTAWLSVVFSDATTCCFHHLKDWESSPHFFNWKKCISHRLAKVKPPPALQFET 113

Query: 166 -------------------EQIVFGIAGSSQLWKRRKEFVRLWWRPDDMRGHLWLEEQL 285
                              + IVFGIAGSSQLWKRRKE+V+LWWRP+DMRGH+WLEEQ+
Sbjct: 114 MNDHLHNGSSIVEEEGLSLKHIVFGIAGSSQLWKRRKEYVKLWWRPNDMRGHVWLEEQV 172


>ref|XP_003610880.1| Beta-1,3-glucosyltransferase [Medicago truncatula]
           gi|355512215|gb|AES93838.1| Beta-1,3-glucosyltransferase
           [Medicago truncatula]
          Length = 538

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 51/119 (42%), Positives = 61/119 (51%), Gaps = 25/119 (21%)
 Frame = +1

Query: 4   VLTLLFSTTAWLSLVFSGTTTRCWHRLKDXXXXXXXXXXXXXXXXXXXXXXXXX------ 165
           +  LL  TTAWLSLVFS  TT C+HR+KD                               
Sbjct: 49  IAALLLFTTAWLSLVFSDATTCCFHRVKDWEGRHHFFPWNKCAPLHLSKATIPPTLQFRT 108

Query: 166 -------------------EQIVFGIAGSSQLWKRRKEFVRLWWRPDDMRGHLWLEEQL 285
                              + IVFGIAGSSQLWKRRKE++RLWWRP+DMRGH+WLEE++
Sbjct: 109 TLDHPHNGSSIAEQEGLSVQHIVFGIAGSSQLWKRRKEYIRLWWRPNDMRGHVWLEEKV 167


>ref|XP_002270850.1| PREDICTED: uncharacterized protein LOC100253017 [Vitis vinifera]
          Length = 533

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 55/123 (44%), Positives = 61/123 (49%), Gaps = 29/123 (23%)
 Frame = +1

Query: 4   VLTLLFSTTAWLSLVFSGTTTRC------WHR------------------LKDXXXXXXX 111
           VL  L ST AWLSLVFSGTTTRC      W R                  L+        
Sbjct: 38  VLAFLLSTAAWLSLVFSGTTTRCWHRFKDWERRPQAFPWGRRRQDRSSSILQPPTTSPPP 97

Query: 112 XXXXXXXXXXXXXXXXXXEQ-----IVFGIAGSSQLWKRRKEFVRLWWRPDDMRGHLWLE 276
                             E+     IVFGIAGSS LWKRRKE VRLWWRP+DMRGH+WLE
Sbjct: 98  PSVSLLPFPRNASLPSAGEELSLRHIVFGIAGSSHLWKRRKELVRLWWRPNDMRGHVWLE 157

Query: 277 EQL 285
           E++
Sbjct: 158 ERV 160


>ref|NP_174595.1| fringe-related protein [Arabidopsis thaliana]
           gi|12322571|gb|AAG51285.1|AC027035_8 unknown protein
           [Arabidopsis thaliana] gi|332193453|gb|AEE31574.1|
           fringe-related protein [Arabidopsis thaliana]
          Length = 548

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 48/119 (40%), Positives = 57/119 (47%), Gaps = 28/119 (23%)
 Frame = +1

Query: 13  LLFSTTAWLSLVFSGTTTRCWHRLKDXXXXXXXXXXXXXXXXXXXXXXXXX--------- 165
           LL ++ AWLSLVFS TT+RCWH LKD                                  
Sbjct: 53  LLLASVAWLSLVFSPTTSRCWHLLKDWEDNHLWNKRYHHPIVTPPPPPPSPPSLPALPLF 112

Query: 166 -------------------EQIVFGIAGSSQLWKRRKEFVRLWWRPDDMRGHLWLEEQL 285
                                ++FGIAGSSQLW+RRKE VRLWW+P  MRGH+WLEEQ+
Sbjct: 113 DHEFRNRSLSEIDKLDLSMNHLMFGIAGSSQLWERRKELVRLWWKPSQMRGHVWLEEQV 171


Top