BLASTX nr result

ID: Coptis21_contig00039277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039277
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17206.3| unnamed protein product [Vitis vinifera]               86   3e-15
ref|XP_002331904.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13
ref|XP_002269642.2| PREDICTED: putative receptor-like protein ki...    79   4e-13
ref|XP_002459535.1| hypothetical protein SORBIDRAFT_02g006240 [S...    78   6e-13
ref|XP_002461676.1| hypothetical protein SORBIDRAFT_02g006310 [S...    77   1e-12

>emb|CBI17206.3| unnamed protein product [Vitis vinifera]
          Length = 840

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 46/90 (51%), Positives = 62/90 (68%), Gaps = 6/90 (6%)
 Frame = -1

Query: 364 MFNDGFSLHVFCKMALPDRVLDIMDMRLLSEETQSKAPNVTNH------LTECLSSVMRI 203
           MF+DG SLH F KMALP+RV++I D  L+ E  ++   N+ NH      + +CL+S+ RI
Sbjct: 727 MFSDGLSLHSFSKMALPERVMEIADSTLVGESGEA-INNIANHGDMEGRMQDCLASIARI 785

Query: 202 GVKCSEELLTERMDIQDVLNEMHSIKEVFL 113
           GV CSEE    RMDI+DV+ E++ IKEVFL
Sbjct: 786 GVACSEESPGGRMDIKDVVMELNIIKEVFL 815


>ref|XP_002331904.1| predicted protein [Populus trichocarpa] gi|222874576|gb|EEF11707.1|
            predicted protein [Populus trichocarpa]
          Length = 1008

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 42/84 (50%), Positives = 56/84 (66%)
 Frame = -1

Query: 364  MFNDGFSLHVFCKMALPDRVLDIMDMRLLSEETQSKAPNVTNHLTECLSSVMRIGVKCSE 185
            MF DG  LH + K+ALPDRV+DI D +LL+E  Q K    T+ + ECL S+ +IGV CSE
Sbjct: 921  MFKDGLELHSYVKIALPDRVVDIADPKLLTEVDQGKG---TDQIVECLISISKIGVFCSE 977

Query: 184  ELLTERMDIQDVLNEMHSIKEVFL 113
            +   ERMDI +V+ E++  K  FL
Sbjct: 978  KFPKERMDISNVVAELNRTKANFL 1001


>ref|XP_002269642.2| PREDICTED: putative receptor-like protein kinase At3g47110-like
            [Vitis vinifera]
          Length = 1372

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 42/90 (46%), Positives = 61/90 (67%), Gaps = 6/90 (6%)
 Frame = -1

Query: 364  MFNDGFSLHVFCKMALPDRVLDIMDMRLLSEETQSKAPNVTNHLT------ECLSSVMRI 203
            MF+DG +LH F KMAL +RV++I D  L+ E +++   N+ NH         CL+S+ RI
Sbjct: 1243 MFSDGLNLHSFSKMALLERVMEIADSNLVGESSEA-INNIENHCDMEGRTQHCLASIARI 1301

Query: 202  GVKCSEELLTERMDIQDVLNEMHSIKEVFL 113
            GV CSEE   +R+DI+DV+ E++ IK+VFL
Sbjct: 1302 GVACSEESPGDRLDIKDVVMELNIIKKVFL 1331


>ref|XP_002459535.1| hypothetical protein SORBIDRAFT_02g006240 [Sorghum bicolor]
            gi|241922912|gb|EER96056.1| hypothetical protein
            SORBIDRAFT_02g006240 [Sorghum bicolor]
          Length = 1047

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 38/89 (42%), Positives = 61/89 (68%), Gaps = 3/89 (3%)
 Frame = -1

Query: 367  DMFNDGFSLHVFCKMALPDRVLDIMDMRLLSEETQSKAPNVTNHLT---ECLSSVMRIGV 197
            DMF DG SLH + + ALPD+V++I D  L   +  S + N T H+T   +CLS+++++GV
Sbjct: 958  DMFRDGLSLHGYAEAALPDKVMEIADSNLWLHDEASNS-NDTRHITRSRKCLSAIIQLGV 1016

Query: 196  KCSEELLTERMDIQDVLNEMHSIKEVFLS 110
             CS++L +ER+ I D   EMH+I++ ++S
Sbjct: 1017 LCSKQLPSERLSISDATAEMHAIRDKYIS 1045


>ref|XP_002461676.1| hypothetical protein SORBIDRAFT_02g006310 [Sorghum bicolor]
            gi|241925053|gb|EER98197.1| hypothetical protein
            SORBIDRAFT_02g006310 [Sorghum bicolor]
          Length = 1050

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 38/89 (42%), Positives = 61/89 (68%), Gaps = 3/89 (3%)
 Frame = -1

Query: 367  DMFNDGFSLHVFCKMALPDRVLDIMDMRLLSEETQSKAPNVTNHLT---ECLSSVMRIGV 197
            DMF DG SLH + K ALP+ V++I D  +   +  +++ N T H+T   ECLS+V+++GV
Sbjct: 961  DMFRDGTSLHYYAKAALPENVMEIADSNMWLHDGVNRS-NDTTHITRTWECLSAVIQLGV 1019

Query: 196  KCSEELLTERMDIQDVLNEMHSIKEVFLS 110
             CS++L TER+ + D   EMH+I++ ++S
Sbjct: 1020 ICSKQLPTERLSMNDAAAEMHAIRDKYIS 1048


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