BLASTX nr result

ID: Coptis21_contig00039267 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039267
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330805.1| predicted protein [Populus trichocarpa] gi|2...   144   6e-33
emb|CBI37693.3| unnamed protein product [Vitis vinifera]              144   1e-32
ref|XP_002283561.1| PREDICTED: COP9 signalosome complex subunit ...   144   1e-32
ref|XP_002527960.1| jun activation domain binding protein, putat...   144   1e-32
emb|CBL87025.1| CSN5 protein [Solanum lycopersicum]                   143   1e-32

>ref|XP_002330805.1| predicted protein [Populus trichocarpa] gi|222872607|gb|EEF09738.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score =  144 bits (364), Expect = 6e-33
 Identities = 70/82 (85%), Positives = 72/82 (87%)
 Frame = +2

Query: 2   DTVSEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDCHLLDLLWNTYWANTLSSSPLLG 181
           D VSEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDCHLLDLLWN YW NTLSSSPLLG
Sbjct: 213 DPVSEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLG 272

Query: 182 SRDYVAGQISDLGVVGDLAEIQ 247
           + DYVAGQISDL    + AE Q
Sbjct: 273 NGDYVAGQISDLAEKLEHAENQ 294


>emb|CBI37693.3| unnamed protein product [Vitis vinifera]
          Length = 260

 Score =  144 bits (362), Expect = 1e-32
 Identities = 69/82 (84%), Positives = 72/82 (87%)
 Frame = +2

Query: 2   DTVSEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDCHLLDLLWNTYWANTLSSSPLLG 181
           D VSEYQTIPLNKIEDFGVHCKQYY+LDITYFKSSLDCHLLDLLWN YW NTLSSSPLLG
Sbjct: 106 DPVSEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLG 165

Query: 182 SRDYVAGQISDLGVVGDLAEIQ 247
           + DYVAGQISDL    + AE Q
Sbjct: 166 NGDYVAGQISDLAEKLEQAENQ 187


>ref|XP_002283561.1| PREDICTED: COP9 signalosome complex subunit 5a-like [Vitis
           vinifera]
          Length = 360

 Score =  144 bits (362), Expect = 1e-32
 Identities = 69/82 (84%), Positives = 72/82 (87%)
 Frame = +2

Query: 2   DTVSEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDCHLLDLLWNTYWANTLSSSPLLG 181
           D VSEYQTIPLNKIEDFGVHCKQYY+LDITYFKSSLDCHLLDLLWN YW NTLSSSPLLG
Sbjct: 206 DPVSEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLG 265

Query: 182 SRDYVAGQISDLGVVGDLAEIQ 247
           + DYVAGQISDL    + AE Q
Sbjct: 266 NGDYVAGQISDLAEKLEQAENQ 287


>ref|XP_002527960.1| jun activation domain binding protein, putative [Ricinus communis]
           gi|223532586|gb|EEF34372.1| jun activation domain
           binding protein, putative [Ricinus communis]
          Length = 367

 Score =  144 bits (362), Expect = 1e-32
 Identities = 69/82 (84%), Positives = 72/82 (87%)
 Frame = +2

Query: 2   DTVSEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDCHLLDLLWNTYWANTLSSSPLLG 181
           D VSEYQTIPLNKIEDFGVHCKQYY+LDITYFKSSLDCHLLDLLWN YW NTLSSSPLLG
Sbjct: 213 DPVSEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLG 272

Query: 182 SRDYVAGQISDLGVVGDLAEIQ 247
           + DYVAGQISDL    + AE Q
Sbjct: 273 NGDYVAGQISDLAEKLEQAENQ 294


>emb|CBL87025.1| CSN5 protein [Solanum lycopersicum]
          Length = 367

 Score =  143 bits (361), Expect = 1e-32
 Identities = 66/72 (91%), Positives = 68/72 (94%)
 Frame = +2

Query: 2   DTVSEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDCHLLDLLWNTYWANTLSSSPLLG 181
           D +SEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDCHLLDLLWN YW NTLSSSPLLG
Sbjct: 213 DPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLG 272

Query: 182 SRDYVAGQISDL 217
           + DYVAGQISDL
Sbjct: 273 NGDYVAGQISDL 284


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