BLASTX nr result

ID: Coptis21_contig00039244 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039244
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304853.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_003538518.1| PREDICTED: uncharacterized protein LOC100781...    57   1e-06
ref|XP_003551268.1| PREDICTED: uncharacterized protein LOC100782...    56   4e-06

>ref|XP_002304853.1| predicted protein [Populus trichocarpa] gi|222842285|gb|EEE79832.1|
           predicted protein [Populus trichocarpa]
          Length = 1538

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/63 (49%), Positives = 41/63 (65%), Gaps = 6/63 (9%)
 Frame = -1

Query: 171 VPNDQVGSHWDWYDEIQWKLIYEKLLS---DFGDFFESDSLPFGELP---ESLSRVYSVL 10
           + N+Q+GS WDW D+    +  + LLS   DFGDFFE+D LPFGE P   ES + ++S  
Sbjct: 73  IANEQIGSRWDWDDDRGAGMDIQALLSEFGDFGDFFENDDLPFGEPPGTAESQALMFSGP 132

Query: 9   DCG 1
           DCG
Sbjct: 133 DCG 135


>ref|XP_003538518.1| PREDICTED: uncharacterized protein LOC100781873 [Glycine max]
          Length = 1918

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 33/68 (48%), Positives = 44/68 (64%), Gaps = 7/68 (10%)
 Frame = -1

Query: 183 THSRVPNDQVGSHWDWYDEIQ-WKLIYEKLLS---DFGDFFESDSLPFGELP---ESLSR 25
           T + V ND +GS+WDW D+ +  ++  + LLS   DFGDFFE+D LPFGE P   ES + 
Sbjct: 468 TITGVGNDPIGSYWDWDDDDRGMEMDIQALLSEFGDFGDFFENDVLPFGEPPGTAESQAL 527

Query: 24  VYSVLDCG 1
           + S  DCG
Sbjct: 528 MLSAPDCG 535


>ref|XP_003551268.1| PREDICTED: uncharacterized protein LOC100782017 [Glycine max]
          Length = 1920

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 7/68 (10%)
 Frame = -1

Query: 183 THSRVPNDQVGSHWDWYDEIQ-WKLIYEKLLS---DFGDFFESDSLPFGELP---ESLSR 25
           T + V N+ +GS+WDW D+ +  ++  + LLS   DFGDFFE+D LPFGE P   ES + 
Sbjct: 468 TITGVGNEPIGSYWDWDDDDRGMEMDIQALLSEFGDFGDFFENDVLPFGEPPGTAESQAL 527

Query: 24  VYSVLDCG 1
           + S  DCG
Sbjct: 528 MLSAPDCG 535


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