BLASTX nr result

ID: Coptis21_contig00039230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039230
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302909.1| cc-nbs-lrr resistance protein [Populus trich...    89   4e-16
ref|XP_002302911.1| cc-nbs-lrr resistance protein [Populus trich...    84   1e-14
ref|XP_002302910.1| cc-nbs-lrr resistance protein [Populus trich...    84   1e-14
ref|XP_002302905.1| nbs-lrr resistance protein [Populus trichoca...    84   1e-14
ref|XP_002335051.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14

>ref|XP_002302909.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222844635|gb|EEE82182.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1075

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 54/116 (46%), Positives = 67/116 (57%), Gaps = 4/116 (3%)
 Frame = -3

Query: 340  SFPERMLPNLTALQSLRIWSCEKLKILPEE-LGNLSSLKSFYISGCCELQCLPE---VGR 173
            S   R+L NL AL+SL IW C KL  LPEE L NL+SL+S YI GC  L CLP     G 
Sbjct: 930  SLSNRVLDNLFALKSLNIWYCGKLGSLPEEGLRNLNSLESLYIRGCGRLNCLPMDGLCGL 989

Query: 172  SSLVELSIRDCSSLTTLLHVLRYKGILHDLVISGCPNLDISKVEFYHLTALRSLII 5
            SSL +L +  C   T+L   +R+   L DL + GCP L+       HLT+L+ L I
Sbjct: 990  SSLRKLVVGSCDKFTSLSEGVRHLTALEDLHLDGCPELNSLPESIQHLTSLQYLSI 1045


>ref|XP_002302911.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222844637|gb|EEE82184.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1053

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 53/116 (45%), Positives = 69/116 (59%), Gaps = 4/116 (3%)
 Frame = -3

Query: 340  SFPERMLPNLTALQSLRIWSCEKLKILPEE-LGNLSSLKSFYISGCCELQCLPE---VGR 173
            S   R+L NL+AL+SL+I  C KL+ LPEE L NL+SL+   IS C  L CLP     G 
Sbjct: 908  SLSNRVLDNLSALKSLKIGDCGKLESLPEEGLRNLNSLEVLRISFCGRLNCLPMNGLCGL 967

Query: 172  SSLVELSIRDCSSLTTLLHVLRYKGILHDLVISGCPNLDISKVEFYHLTALRSLII 5
            SSL +L I DC   T+L   +R+  +L DL +  CP L+       HLT+L+SL I
Sbjct: 968  SSLRKLVIVDCDKFTSLSEGVRHLRVLEDLDLVNCPELNSLPESIQHLTSLQSLTI 1023


>ref|XP_002302910.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222844636|gb|EEE82183.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1131

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 54/116 (46%), Positives = 69/116 (59%), Gaps = 4/116 (3%)
 Frame = -3

Query: 340  SFPERMLPNLTALQSLRIWSCEKLKILPEE-LGNLSSLKSFYISGCCELQCLPE---VGR 173
            S   R+L NLTAL+SL+I  C KL+ LPEE L NL+SL+   I  C  L  LP     G 
Sbjct: 938  SLSNRVLDNLTALKSLKIQCCYKLQSLPEEGLRNLNSLEVLDIHDCGRLNSLPMKGLCGL 997

Query: 172  SSLVELSIRDCSSLTTLLHVLRYKGILHDLVISGCPNLDISKVEFYHLTALRSLII 5
            SSL +L IR+C   T+L   +R+   L DL++ GCP L+       HLT+LRSL I
Sbjct: 998  SSLRKLFIRNCDKFTSLSEGVRHLTALEDLLLHGCPELNSLPESIKHLTSLRSLHI 1053


>ref|XP_002302905.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222844631|gb|EEE82178.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 968

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 53/116 (45%), Positives = 69/116 (59%), Gaps = 4/116 (3%)
 Frame = -3

Query: 340  SFPERMLPNLTALQSLRIWSCEKLKILPEE-LGNLSSLKSFYISGCCELQCLPE---VGR 173
            S   R+L NL+AL+SL+I  C KL+ LPEE L NL+SL+   IS C  L CLP     G 
Sbjct: 823  SLSNRVLDNLSALKSLKIGDCGKLESLPEEGLRNLNSLEVLRISFCGRLNCLPMNGLCGL 882

Query: 172  SSLVELSIRDCSSLTTLLHVLRYKGILHDLVISGCPNLDISKVEFYHLTALRSLII 5
            SSL +L I DC   T+L   +R+  +L DL +  CP L+       HLT+L+SL I
Sbjct: 883  SSLRKLVIVDCDKFTSLSEGVRHLRVLEDLDLVNCPELNSLPESIQHLTSLQSLTI 938


>ref|XP_002335051.1| predicted protein [Populus trichocarpa] gi|222832701|gb|EEE71178.1|
           predicted protein [Populus trichocarpa]
          Length = 153

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 52/116 (44%), Positives = 67/116 (57%), Gaps = 4/116 (3%)
 Frame = -3

Query: 340 SFPERMLPNLTALQSLRIWSCEKLKILPEE-LGNLSSLKSFYISGCCELQCLPE---VGR 173
           S   R+L NL++L+ L IW C KL+ LPEE L NL+SL+   I  C  L CLP     G 
Sbjct: 6   SLSNRVLDNLSSLKRLSIWECGKLESLPEEGLRNLNSLEFLMIFDCGRLNCLPMNGLCGL 65

Query: 172 SSLVELSIRDCSSLTTLLHVLRYKGILHDLVISGCPNLDISKVEFYHLTALRSLII 5
           SSL  L+I+ C   T+L   +R+   L DL +S CP L+       HLT+LRSL I
Sbjct: 66  SSLRRLNIQYCDKFTSLSEGVRHLTALEDLWLSECPELNSLPESIQHLTSLRSLTI 121


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