BLASTX nr result

ID: Coptis21_contig00039191 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039191
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_193862.1| uncharacterized protein [Arabidopsis thaliana] ...    62   6e-08
ref|XP_002867855.1| hypothetical protein ARALYDRAFT_492752 [Arab...    61   8e-08
ref|XP_002535810.1| hypothetical protein RCOM_0389730 [Ricinus c...    61   8e-08
ref|XP_004151872.1| PREDICTED: uncharacterized protein LOC101212...    60   2e-07
ref|XP_002316703.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>ref|NP_193862.1| uncharacterized protein [Arabidopsis thaliana]
           gi|3402750|emb|CAA20196.1| putative protein [Arabidopsis
           thaliana] gi|7268927|emb|CAB79130.1| putative protein
           [Arabidopsis thaliana] gi|48310105|gb|AAT41754.1|
           At4g21310 [Arabidopsis thaliana]
           gi|50198867|gb|AAT70460.1| At4g21310 [Arabidopsis
           thaliana] gi|332659038|gb|AEE84438.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 168

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 26/37 (70%), Positives = 33/37 (89%)
 Frame = -3

Query: 299 CGLTHHRYLSIGGILCFVHGLFCVSYCVSASSTTR*Q 189
           CG++HHR LSIGGILCFVHGLF V+Y +SA+++TR Q
Sbjct: 126 CGISHHRVLSIGGILCFVHGLFAVAYYISATASTREQ 162


>ref|XP_002867855.1| hypothetical protein ARALYDRAFT_492752 [Arabidopsis lyrata subsp.
           lyrata] gi|297313691|gb|EFH44114.1| hypothetical protein
           ARALYDRAFT_492752 [Arabidopsis lyrata subsp. lyrata]
          Length = 169

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 25/37 (67%), Positives = 33/37 (89%)
 Frame = -3

Query: 299 CGLTHHRYLSIGGILCFVHGLFCVSYCVSASSTTR*Q 189
           CG++HHR LSIGGILCF+HGLF V+Y +SA+++TR Q
Sbjct: 127 CGISHHRVLSIGGILCFIHGLFAVAYYISATASTREQ 163


>ref|XP_002535810.1| hypothetical protein RCOM_0389730 [Ricinus communis]
           gi|223521886|gb|EEF26573.1| hypothetical protein
           RCOM_0389730 [Ricinus communis]
          Length = 65

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 25/32 (78%), Positives = 29/32 (90%)
 Frame = -3

Query: 299 CGLTHHRYLSIGGILCFVHGLFCVSYCVSASS 204
           CG THH +LSIGGILCFVHGLFCV+Y VSA++
Sbjct: 24  CGFTHHHFLSIGGILCFVHGLFCVAYYVSATA 55


>ref|XP_004151872.1| PREDICTED: uncharacterized protein LOC101212188 [Cucumis sativus]
           gi|449484054|ref|XP_004156770.1| PREDICTED:
           uncharacterized LOC101212188 [Cucumis sativus]
          Length = 158

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 24/32 (75%), Positives = 29/32 (90%)
 Frame = -3

Query: 299 CGLTHHRYLSIGGILCFVHGLFCVSYCVSASS 204
           CG THH +LSIGGILCFVHGLFCV+Y V+A++
Sbjct: 125 CGFTHHHFLSIGGILCFVHGLFCVAYYVTATA 156


>ref|XP_002316703.1| predicted protein [Populus trichocarpa] gi|222859768|gb|EEE97315.1|
           predicted protein [Populus trichocarpa]
          Length = 163

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/35 (77%), Positives = 31/35 (88%)
 Frame = -3

Query: 299 CGLTHHRYLSIGGILCFVHGLFCVSYCVSASSTTR 195
           CGL+H+R LSIGGILCFVHGLF VSY VSA++T R
Sbjct: 126 CGLSHNRVLSIGGILCFVHGLFTVSYYVSATATAR 160


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