BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039168
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512033.1| pentatricopeptide repeat-containing protein,...   130   1e-28
ref|XP_002274984.2| PREDICTED: pentatricopeptide repeat-containi...   128   4e-28
emb|CBI27247.3| unnamed protein product [Vitis vinifera]              128   4e-28
ref|XP_002304609.1| predicted protein [Populus trichocarpa] gi|2...   118   4e-25
ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containi...   116   2e-24

>ref|XP_002512033.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549213|gb|EEF50702.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 319

 Score =  130 bits (327), Expect = 1e-28
 Identities = 63/104 (60%), Positives = 80/104 (76%), Gaps = 6/104 (5%)
 Frame = +3

Query: 3   QNAFLIFERMKERNVITWSA------QNRYGEKAIFMFGKMKEAGVRPNEFTFTGILSAC 164
           +NA  +F+ MKERNV+TW+A      Q+ Y E+ + +F  M+EA +RPNE TFTGIL+ C
Sbjct: 127 KNAIRVFDLMKERNVMTWTALICGAAQHGYSEETLSLFNMMQEAKIRPNELTFTGILNVC 186

Query: 165 VHAGLVDEGLKYFYDMVEEYGLEPRIQHYGCVVDLLGKAGLLDK 296
            H+GLV+EG KYF  M+EEYGLE RIQHYGC+VDL GKAGLLD+
Sbjct: 187 AHSGLVEEGKKYF-RMIEEYGLERRIQHYGCMVDLFGKAGLLDE 229


>ref|XP_002274984.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 324

 Score =  128 bits (322), Expect = 4e-28
 Identities = 62/104 (59%), Positives = 83/104 (79%), Gaps = 6/104 (5%)
 Frame = +3

Query: 3   QNAFLIFERMKERNVITW------SAQNRYGEKAIFMFGKMKEAGVRPNEFTFTGILSAC 164
           ++AF +F+ M+E+NV +W      SAQ+ YG++A+ MF  M++ GV+PNE TFTGILSAC
Sbjct: 127 KSAFRVFDLMQEKNVASWTALICGSAQHGYGKEALSMFELMQDMGVKPNEMTFTGILSAC 186

Query: 165 VHAGLVDEGLKYFYDMVEEYGLEPRIQHYGCVVDLLGKAGLLDK 296
             AGLV+EG KYF + +EEYGLEPRIQH+GC+VDL GKAGLL++
Sbjct: 187 AQAGLVEEGRKYF-NKIEEYGLEPRIQHFGCMVDLFGKAGLLEE 229


>emb|CBI27247.3| unnamed protein product [Vitis vinifera]
          Length = 268

 Score =  128 bits (322), Expect = 4e-28
 Identities = 62/104 (59%), Positives = 83/104 (79%), Gaps = 6/104 (5%)
 Frame = +3

Query: 3   QNAFLIFERMKERNVITW------SAQNRYGEKAIFMFGKMKEAGVRPNEFTFTGILSAC 164
           ++AF +F+ M+E+NV +W      SAQ+ YG++A+ MF  M++ GV+PNE TFTGILSAC
Sbjct: 71  KSAFRVFDLMQEKNVASWTALICGSAQHGYGKEALSMFELMQDMGVKPNEMTFTGILSAC 130

Query: 165 VHAGLVDEGLKYFYDMVEEYGLEPRIQHYGCVVDLLGKAGLLDK 296
             AGLV+EG KYF + +EEYGLEPRIQH+GC+VDL GKAGLL++
Sbjct: 131 AQAGLVEEGRKYF-NKIEEYGLEPRIQHFGCMVDLFGKAGLLEE 173


>ref|XP_002304609.1| predicted protein [Populus trichocarpa] gi|222842041|gb|EEE79588.1|
           predicted protein [Populus trichocarpa]
          Length = 431

 Score =  118 bits (296), Expect = 4e-25
 Identities = 58/104 (55%), Positives = 78/104 (75%), Gaps = 6/104 (5%)
 Frame = +3

Query: 3   QNAFLIFERMKERNVITWSA------QNRYGEKAIFMFGKMKEAGVRPNEFTFTGILSAC 164
           +NA  +F  M+ERNV TW+A      Q+ + ++ + +F  M+EAGVRPNE TFTGIL+AC
Sbjct: 239 KNAVWVFVLMQERNVSTWTALICGAAQHGFCQEVLSLFKMMQEAGVRPNEMTFTGILNAC 298

Query: 165 VHAGLVDEGLKYFYDMVEEYGLEPRIQHYGCVVDLLGKAGLLDK 296
              GL++EG KYF  M++E GLEPRIQHYGC+VD+ GKAGLL++
Sbjct: 299 ARKGLIEEGRKYF-KMIKETGLEPRIQHYGCMVDMFGKAGLLEE 341


>ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
           [Vitis vinifera]
          Length = 643

 Score =  116 bits (290), Expect = 2e-24
 Identities = 55/104 (52%), Positives = 76/104 (73%), Gaps = 6/104 (5%)
 Frame = +3

Query: 3   QNAFLIFERMKERNVITWSAQ------NRYGEKAIFMFGKMKEAGVRPNEFTFTGILSAC 164
           + A+ IF+RM ERNV++WSA       + YG +AI  F +M++ GV P++ T TG+LSAC
Sbjct: 323 EKAYSIFKRMDERNVVSWSAMISGFAMHGYGREAIEAFEQMQQLGVSPDDQTLTGVLSAC 382

Query: 165 VHAGLVDEGLKYFYDMVEEYGLEPRIQHYGCVVDLLGKAGLLDK 296
            H GLVD+GL +F  M + +G+EP I HYGC+VDLLG+AGLLD+
Sbjct: 383 SHCGLVDDGLMFFDRMSKVFGIEPNIHHYGCMVDLLGRAGLLDQ 426