BLASTX nr result

ID: Coptis21_contig00039125 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039125
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37270.3| unnamed protein product [Vitis vinifera]              105   4e-21
ref|XP_002521118.1| conserved hypothetical protein [Ricinus comm...    92   6e-17
ref|XP_003623189.1| hypothetical protein MTR_7g065510 [Medicago ...    82   6e-14
ref|XP_002301771.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_004152019.1| PREDICTED: uncharacterized protein LOC101208...    66   3e-09

>emb|CBI37270.3| unnamed protein product [Vitis vinifera]
          Length = 475

 Score =  105 bits (262), Expect = 4e-21
 Identities = 63/142 (44%), Positives = 88/142 (61%), Gaps = 5/142 (3%)
 Frame = -3

Query: 413 DADSKDLVLFKK-----RRTENTDESKITTKVAESFAASIRKGNARAIFYDSLNLKRLGS 249
           +A S+ +VLF+      +R +      +    +ES+A   R+  ARA FY +LNL+RLGS
Sbjct: 231 EAKSRGVVLFRNEGVNTKRLKRVKGRDLGYNNSESYAILFRRDRARACFYHTLNLRRLGS 290

Query: 248 FRNKQQYSVHTFEGKEEGRDMGHQVDLAAHVGNKVLPISDATAISACKITNYQCWSSAKK 69
           F  ++   +   E    G  +G + D AAHVGNKVLPISD T +S+   TN Q  +S KK
Sbjct: 291 FHKRKPMKMKK-EDIARGLGIGLKGDSAAHVGNKVLPISDTT-LSSSTNTNEQWGTSEKK 348

Query: 68  DELKGDKNRAISRMKELWKWAA 3
           + +KGDK +AISRMKEL++WAA
Sbjct: 349 ERIKGDKTKAISRMKELFRWAA 370


>ref|XP_002521118.1| conserved hypothetical protein [Ricinus communis]
           gi|223539687|gb|EEF41269.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 271

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 60/147 (40%), Positives = 87/147 (59%), Gaps = 10/147 (6%)
 Frame = -3

Query: 413 DADSKDLVLFKKRRTENTDE----SKITTKVAESFAASIRKGNARAIFYDSLNLKRLGSF 246
           +A  KD +L K  R+    E     K   +    FA   RK  A A FY +L+LKR+ S+
Sbjct: 33  EAKGKDRILLKHCRSNGRSERGKNKKFGLRGFRPFAILCRKDVATACFYSTLHLKRVNSY 92

Query: 245 RNKQQYSVHTFEGKEE----GRDMGH-QVDLAA-HVGNKVLPISDATAISACKITNYQCW 84
             +Q++ +++ + K+E    G  M + +VD    HVGNKVLP++DAT +S+    N QC 
Sbjct: 93  NRRQKHWMYSMKMKKEDIVKGEGMSNSKVDSTNNHVGNKVLPVADAT-LSSSTSANDQCS 151

Query: 83  SSAKKDELKGDKNRAISRMKELWKWAA 3
           S  K ++LKGDK +A+SRMKEL +WAA
Sbjct: 152 SLEKVEKLKGDKAKAMSRMKELLRWAA 178


>ref|XP_003623189.1| hypothetical protein MTR_7g065510 [Medicago truncatula]
           gi|355498204|gb|AES79407.1| hypothetical protein
           MTR_7g065510 [Medicago truncatula]
          Length = 274

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 49/127 (38%), Positives = 74/127 (58%), Gaps = 2/127 (1%)
 Frame = -3

Query: 377 RRTENTDESKITTKVAESFAASIRKGNARAIFYDSLNLKRLGSFRNKQQYSVHTFEGKEE 198
           +RT+    SK   K  + F+   RK   +A F+ +L+LKR+G  R    YS+   + +E 
Sbjct: 41  KRTKRFSCSKDGYKNLKIFSLLYRKDIPKACFFRTLSLKRIGISRRHFVYSMK-MKKEES 99

Query: 197 GRDMG--HQVDLAAHVGNKVLPISDATAISACKITNYQCWSSAKKDELKGDKNRAISRMK 24
            RD G  ++ D   H GNKVLPI+    +S+    N QC ++  KD++KGD+ + +SRMK
Sbjct: 100 SRDEGIVNKTDSTTHGGNKVLPITQEAPLSSSAERNDQCDNTITKDQVKGDRKKPMSRMK 159

Query: 23  ELWKWAA 3
           EL +WAA
Sbjct: 160 ELLRWAA 166


>ref|XP_002301771.1| predicted protein [Populus trichocarpa] gi|222843497|gb|EEE81044.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 38/70 (54%), Positives = 50/70 (71%)
 Frame = -3

Query: 212 EGKEEGRDMGHQVDLAAHVGNKVLPISDATAISACKITNYQCWSSAKKDELKGDKNRAIS 33
           E    G+   ++VD AAH GNKVLP+SD T +S+   TN +C +  KKD++KGDK +AIS
Sbjct: 5   ETAARGQVTSNKVDPAAHAGNKVLPVSDTT-LSSSASTNEKCSTLEKKDKVKGDKAKAIS 63

Query: 32  RMKELWKWAA 3
           RMKEL +WAA
Sbjct: 64  RMKELLRWAA 73


>ref|XP_004152019.1| PREDICTED: uncharacterized protein LOC101208427 [Cucumis sativus]
           gi|449518256|ref|XP_004166158.1| PREDICTED:
           uncharacterized LOC101208427 [Cucumis sativus]
          Length = 274

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 46/130 (35%), Positives = 69/130 (53%), Gaps = 6/130 (4%)
 Frame = -3

Query: 377 RRTENTDESKITTKVAESFAASIRKGNARAIFYDSLNLK--RLGSFRNKQQYSVHTFEGK 204
           +R++  +  K   K  +SFA   RK  +++ FY ++N+K  R   F N QQY +   + +
Sbjct: 49  QRSKGFEGRKFDLKKLKSFALLCRKDISKSCFYSTINIKRPRTQGFDNMQQYWIQKMKKE 108

Query: 203 EEGR---DMGHQVDLAAHVGNKVLPISDATAISACKITNYQCWSSAKKDELKGD-KNRAI 36
           +  R   ++G + D + H G KVLPI+DAT    C         S KK    G+ K +A 
Sbjct: 109 DVTRGIIEIGQKAD-SVHAGTKVLPITDATLAEQCSN------KSEKKVLANGENKTKAK 161

Query: 35  SRMKELWKWA 6
           SRMKEL +WA
Sbjct: 162 SRMKELLRWA 171


Top