BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039118
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]              83   3e-14
gb|AAD22505.1| putative retroelement gag/pol polyprotein [Arabid...    82   5e-14
gb|ABF96908.1| retrotransposon protein, putative, unclassified [...    80   2e-13
gb|AAX95114.1| retrotransposon protein, putative, unclassified [...    79   4e-13
gb|AAM93706.1| putative gag-pol precursor [Oryza sativa Japonica...    79   4e-13

>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 39/79 (49%), Positives = 55/79 (69%)
 Frame = +2

Query: 5    YSLLRKNTTFVWSAECEEAFVQLKKYLQEIPTLTKPEEGDKLLLYLAVSDFAISSVLVKV 184
            Y+LL++   F W  + EEAF +LK YL   P L KPE G+ L LY+AVSD A+SSVLV+ 
Sbjct: 1080 YNLLKRRAQFDWDKDSEEAFEKLKDYLSTPPILVKPEVGETLYLYIAVSDHAVSSVLVRE 1139

Query: 185  EDKVERPVYFQSKKILEAE 241
            +   +RP+++ SK ++EAE
Sbjct: 1140 DRGEQRPIFYTSKSLVEAE 1158


>gb|AAD22505.1| putative retroelement gag/pol polyprotein [Arabidopsis thaliana]
          Length = 1212

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 43/79 (54%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
 Frame = +2

Query: 8   SLLRK-NTTFVWSAECEEAFVQLKKYLQEIPTLTKPEEGDKLLLYLAVSDFAISSVLVKV 184
           +LLRK N  FVW   CEEAF QLK YL E   L KPE G++L LY++VS+ AIS VLV+V
Sbjct: 577 TLLRKVNKGFVWDERCEEAFRQLKSYLSEPLVLAKPEFGERLFLYISVSENAISGVLVRV 636

Query: 185 EDKVERPVYFQSKKILEAE 241
           E   ERP+++ SK   + E
Sbjct: 637 ERSDERPIFYVSKSFSDVE 655


>gb|ABF96908.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 645

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 32/79 (40%), Positives = 57/79 (72%)
 Frame = +2

Query: 5   YSLLRKNTTFVWSAECEEAFVQLKKYLQEIPTLTKPEEGDKLLLYLAVSDFAISSVLVKV 184
           ++LL+K   FVW+ E EEAF+ LK+YL  +P L  P+  ++L LY+A + +++S+++V  
Sbjct: 361 FTLLKKQEKFVWTQEAEEAFIALKRYLSNLPVLVAPQPNEELFLYIAATPYSVSTIIVVE 420

Query: 185 EDKVERPVYFQSKKILEAE 241
            +KV+RPVY+ S+ + +A+
Sbjct: 421 REKVQRPVYYVSEALHDAK 439


>gb|AAX95114.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group] gi|77548885|gb|ABA91682.1|
           retrotransposon protein, putative, unclassified [Oryza
           sativa Japonica Group]
          Length = 330

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 34/79 (43%), Positives = 56/79 (70%)
 Frame = +2

Query: 5   YSLLRKNTTFVWSAECEEAFVQLKKYLQEIPTLTKPEEGDKLLLYLAVSDFAISSVLVKV 184
           ++LL+K   FVW+ E EEAFV LK+YL   P L  P+  ++L LY+A + +++S+V+V  
Sbjct: 68  FTLLKKQDKFVWTQEAEEAFVALKRYLSNPPVLVAPQPNEELFLYIAATSYSVSTVIVVE 127

Query: 185 EDKVERPVYFQSKKILEAE 241
            +KV+RPVY+ S+ + +A+
Sbjct: 128 REKVQRPVYYVSEALHDAK 146


>gb|AAM93706.1| putative gag-pol precursor [Oryza sativa Japonica Group]
           gi|31432507|gb|AAP54129.1| transposon protein, putative,
           unclassified [Oryza sativa Japonica Group]
          Length = 816

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 35/79 (44%), Positives = 56/79 (70%)
 Frame = +2

Query: 5   YSLLRKNTTFVWSAECEEAFVQLKKYLQEIPTLTKPEEGDKLLLYLAVSDFAISSVLVKV 184
           ++LL+K   FVW+ E EEAFV LK+YL   P L  P+  ++L LY+A + ++IS+V+V  
Sbjct: 214 FALLKKQDKFVWTQEAEEAFVALKRYLSNPPVLVAPQPNEELFLYIAATPYSISTVIVVE 273

Query: 185 EDKVERPVYFQSKKILEAE 241
            +KV+RPVY+ S+ + +A+
Sbjct: 274 REKVQRPVYYVSEALHDAK 292