BLASTX nr result
ID: Coptis21_contig00039116
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00039116 (321 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003570973.1| PREDICTED: pentatricopeptide repeat-containi... 99 3e-19 ref|NP_001183615.1| uncharacterized protein LOC100502209 [Zea ma... 96 4e-18 ref|NP_001132129.1| uncharacterized protein LOC100193546 [Zea ma... 96 4e-18 ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containi... 94 1e-17 ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containi... 91 1e-16 >ref|XP_003570973.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310-like [Brachypodium distachyon] Length = 472 Score = 99.4 bits (246), Expect = 3e-19 Identities = 49/96 (51%), Positives = 67/96 (69%) Frame = +3 Query: 6 LERAYSFVEIMPMEPNLATLGSLLSACRVHNNVELGEVVLEKINSFCSYGGGASVLLSNM 185 L RA+ ++ MP +PNLA LG+LLSAC ++N +E+GE+VL+KI S CSY GGA+VLLSN+ Sbjct: 375 LSRAFQLIDSMPFDPNLAILGALLSACSINNELEIGELVLKKIESVCSYKGGANVLLSNI 434 Query: 186 YASGRQWCEVVDDREGKKEGNSKRRNPPGRSWIEVK 293 YA+ W E VD K + R PPG+S + V+ Sbjct: 435 YANQNLWHE-VDSLRRKIRNEATFRKPPGQSLVAVE 469 >ref|NP_001183615.1| uncharacterized protein LOC100502209 [Zea mays] gi|238013452|gb|ACR37761.1| unknown [Zea mays] gi|413926458|gb|AFW66390.1| hypothetical protein ZEAMMB73_680096 [Zea mays] gi|413926459|gb|AFW66391.1| hypothetical protein ZEAMMB73_680096 [Zea mays] Length = 162 Score = 95.5 bits (236), Expect = 4e-18 Identities = 49/93 (52%), Positives = 62/93 (66%) Frame = +3 Query: 6 LERAYSFVEIMPMEPNLATLGSLLSACRVHNNVELGEVVLEKINSFCSYGGGASVLLSNM 185 + RAY F+ +MP EPNL LG+LLSAC ++N +E+GE+VL KI+ CSY GGA VLLSN+ Sbjct: 62 VRRAYEFISMMPFEPNLEILGALLSACSINNELEIGELVLNKIDMVCSYKGGAGVLLSNI 121 Query: 186 YASGRQWCEVVDDREGKKEGNSKRRNPPGRSWI 284 YA+ W E VD K + R PPG S I Sbjct: 122 YANQNLWHE-VDTIRRKIRTEAIVRKPPGHSLI 153 >ref|NP_001132129.1| uncharacterized protein LOC100193546 [Zea mays] gi|194693506|gb|ACF80837.1| unknown [Zea mays] gi|413926460|gb|AFW66392.1| hypothetical protein ZEAMMB73_680096 [Zea mays] Length = 473 Score = 95.5 bits (236), Expect = 4e-18 Identities = 49/93 (52%), Positives = 62/93 (66%) Frame = +3 Query: 6 LERAYSFVEIMPMEPNLATLGSLLSACRVHNNVELGEVVLEKINSFCSYGGGASVLLSNM 185 + RAY F+ +MP EPNL LG+LLSAC ++N +E+GE+VL KI+ CSY GGA VLLSN+ Sbjct: 373 VRRAYEFISMMPFEPNLEILGALLSACSINNELEIGELVLNKIDMVCSYKGGAGVLLSNI 432 Query: 186 YASGRQWCEVVDDREGKKEGNSKRRNPPGRSWI 284 YA+ W E VD K + R PPG S I Sbjct: 433 YANQNLWHE-VDTIRRKIRTEAIVRKPPGHSLI 464 >ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520 [Vitis vinifera] Length = 663 Score = 94.0 bits (232), Expect = 1e-17 Identities = 52/106 (49%), Positives = 69/106 (65%), Gaps = 2/106 (1%) Frame = +3 Query: 6 LERAYSFVEIMPMEPNLATLGSLLSACRVHNNVELGEVVLEKINSFC--SYGGGASVLLS 179 LE A+ ++ MPMEP++ +LLSACR+H +V+LGE ++ I C S+GGG VLLS Sbjct: 443 LESAFEAIKSMPMEPDVVAWRALLSACRIHGDVDLGERIINHIAELCPGSHGGG-YVLLS 501 Query: 180 NMYASGRQWCEVVDDREGKKEGNSKRRNPPGRSWIEVKGVVHEFLA 317 N+YAS QW V R+ + S+ PG SWIE+ GVVHEFLA Sbjct: 502 NLYASMGQWESVTKVRKAMSQRGSE--GCPGCSWIEIDGVVHEFLA 545 >ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230 [Vitis vinifera] Length = 758 Score = 90.5 bits (223), Expect = 1e-16 Identities = 51/104 (49%), Positives = 62/104 (59%) Frame = +3 Query: 6 LERAYSFVEIMPMEPNLATLGSLLSACRVHNNVELGEVVLEKINSFCSYGGGASVLLSNM 185 LE+AY+ + MP+ P+ G+LLS+CRVHNNV LGEV EK+ G +LLSN+ Sbjct: 539 LEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNI 598 Query: 186 YASGRQWCEVVDDREGKKEGNSKRRNPPGRSWIEVKGVVHEFLA 317 YAS W EV R+ K N R PG SWIEVK VH LA Sbjct: 599 YASKGMWNEVNRVRDMMK--NKGLRKNPGCSWIEVKNKVHMLLA 640