BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039116
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003570973.1| PREDICTED: pentatricopeptide repeat-containi...    99   3e-19
ref|NP_001183615.1| uncharacterized protein LOC100502209 [Zea ma...    96   4e-18
ref|NP_001132129.1| uncharacterized protein LOC100193546 [Zea ma...    96   4e-18
ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containi...    94   1e-17
ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containi...    91   1e-16

>ref|XP_003570973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Brachypodium distachyon]
          Length = 472

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 49/96 (51%), Positives = 67/96 (69%)
 Frame = +3

Query: 6   LERAYSFVEIMPMEPNLATLGSLLSACRVHNNVELGEVVLEKINSFCSYGGGASVLLSNM 185
           L RA+  ++ MP +PNLA LG+LLSAC ++N +E+GE+VL+KI S CSY GGA+VLLSN+
Sbjct: 375 LSRAFQLIDSMPFDPNLAILGALLSACSINNELEIGELVLKKIESVCSYKGGANVLLSNI 434

Query: 186 YASGRQWCEVVDDREGKKEGNSKRRNPPGRSWIEVK 293
           YA+   W E VD    K    +  R PPG+S + V+
Sbjct: 435 YANQNLWHE-VDSLRRKIRNEATFRKPPGQSLVAVE 469


>ref|NP_001183615.1| uncharacterized protein LOC100502209 [Zea mays]
           gi|238013452|gb|ACR37761.1| unknown [Zea mays]
           gi|413926458|gb|AFW66390.1| hypothetical protein
           ZEAMMB73_680096 [Zea mays] gi|413926459|gb|AFW66391.1|
           hypothetical protein ZEAMMB73_680096 [Zea mays]
          Length = 162

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 49/93 (52%), Positives = 62/93 (66%)
 Frame = +3

Query: 6   LERAYSFVEIMPMEPNLATLGSLLSACRVHNNVELGEVVLEKINSFCSYGGGASVLLSNM 185
           + RAY F+ +MP EPNL  LG+LLSAC ++N +E+GE+VL KI+  CSY GGA VLLSN+
Sbjct: 62  VRRAYEFISMMPFEPNLEILGALLSACSINNELEIGELVLNKIDMVCSYKGGAGVLLSNI 121

Query: 186 YASGRQWCEVVDDREGKKEGNSKRRNPPGRSWI 284
           YA+   W E VD    K    +  R PPG S I
Sbjct: 122 YANQNLWHE-VDTIRRKIRTEAIVRKPPGHSLI 153


>ref|NP_001132129.1| uncharacterized protein LOC100193546 [Zea mays]
           gi|194693506|gb|ACF80837.1| unknown [Zea mays]
           gi|413926460|gb|AFW66392.1| hypothetical protein
           ZEAMMB73_680096 [Zea mays]
          Length = 473

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 49/93 (52%), Positives = 62/93 (66%)
 Frame = +3

Query: 6   LERAYSFVEIMPMEPNLATLGSLLSACRVHNNVELGEVVLEKINSFCSYGGGASVLLSNM 185
           + RAY F+ +MP EPNL  LG+LLSAC ++N +E+GE+VL KI+  CSY GGA VLLSN+
Sbjct: 373 VRRAYEFISMMPFEPNLEILGALLSACSINNELEIGELVLNKIDMVCSYKGGAGVLLSNI 432

Query: 186 YASGRQWCEVVDDREGKKEGNSKRRNPPGRSWI 284
           YA+   W E VD    K    +  R PPG S I
Sbjct: 433 YANQNLWHE-VDTIRRKIRTEAIVRKPPGHSLI 464


>ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 663

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 52/106 (49%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
 Frame = +3

Query: 6   LERAYSFVEIMPMEPNLATLGSLLSACRVHNNVELGEVVLEKINSFC--SYGGGASVLLS 179
           LE A+  ++ MPMEP++    +LLSACR+H +V+LGE ++  I   C  S+GGG  VLLS
Sbjct: 443 LESAFEAIKSMPMEPDVVAWRALLSACRIHGDVDLGERIINHIAELCPGSHGGG-YVLLS 501

Query: 180 NMYASGRQWCEVVDDREGKKEGNSKRRNPPGRSWIEVKGVVHEFLA 317
           N+YAS  QW  V   R+   +  S+    PG SWIE+ GVVHEFLA
Sbjct: 502 NLYASMGQWESVTKVRKAMSQRGSE--GCPGCSWIEIDGVVHEFLA 545


>ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
          Length = 758

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 51/104 (49%), Positives = 62/104 (59%)
 Frame = +3

Query: 6   LERAYSFVEIMPMEPNLATLGSLLSACRVHNNVELGEVVLEKINSFCSYGGGASVLLSNM 185
           LE+AY+ +  MP+ P+    G+LLS+CRVHNNV LGEV  EK+        G  +LLSN+
Sbjct: 539 LEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNI 598

Query: 186 YASGRQWCEVVDDREGKKEGNSKRRNPPGRSWIEVKGVVHEFLA 317
           YAS   W EV   R+  K  N   R  PG SWIEVK  VH  LA
Sbjct: 599 YASKGMWNEVNRVRDMMK--NKGLRKNPGCSWIEVKNKVHMLLA 640