BLASTX nr result

ID: Coptis21_contig00039092 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039092
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326901.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_002281880.1| PREDICTED: probable LRR receptor-like serine...    99   3e-19
ref|XP_002510333.1| serine-threonine protein kinase, plant-type,...    95   5e-18
emb|CAN64301.1| hypothetical protein VITISV_034921 [Vitis vinifera]    94   1e-17
ref|XP_002533279.1| serine-threonine protein kinase, plant-type,...    88   8e-16

>ref|XP_002326901.1| predicted protein [Populus trichocarpa] gi|222835216|gb|EEE73651.1|
           predicted protein [Populus trichocarpa]
          Length = 609

 Score =  107 bits (267), Expect = 1e-21
 Identities = 64/162 (39%), Positives = 87/162 (53%), Gaps = 4/162 (2%)
 Frame = -3

Query: 482 PLPAEPSSSQTVIHFSTIGSPNYTPIATKQKSKKRXXXXXXXXXXXXXXXXXXXXVIFFL 303
           PLP +P+SSQT+IH +   SP        + SKK+                     + FL
Sbjct: 231 PLPTQPTSSQTIIHSNPNISPPSALSPRNRGSKKKHYESAGLAAACSLLVISIITAVVFL 290

Query: 302 Y----RXXXXXXXXXKNWVLPEDVVVGIANANRVLRDFVFEELKLATNNFDSVSKMKGSV 135
                R         +   +PED+ V IA+  +VL+ F FEE++ AT N  S S++ GSV
Sbjct: 291 SCKKTREKVSGRGRERKQAVPEDIRVEIASYEQVLKVFKFEEVRKATENLSSESRINGSV 350

Query: 134 YRGMLGEEVVAIKKVKEDSWKEVKILTKINHFNLIRLYGVCE 9
           YRG  G E++A+KK+  D  KEV IL +INHFNLI+L GVCE
Sbjct: 351 YRGEFGGEILAVKKMSRDVTKEVNILKRINHFNLIKLEGVCE 392


>ref|XP_002281880.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g07650-like [Vitis vinifera]
          Length = 622

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 63/164 (38%), Positives = 88/164 (53%), Gaps = 6/164 (3%)
 Frame = -3

Query: 482 PLPAEPSSSQTVIHFS--TIGSPNYTPIATKQKSKKRXXXXXXXXXXXXXXXXXXXXVIF 309
           PL  EP SSQT  H +   +  P  T  +   +SK+R                     I 
Sbjct: 233 PLKTEPLSSQTKTHATQPVLDPPPPTSDSGSSRSKRRIYLGAGIAAGCFLLGPSVIFSIV 292

Query: 308 FLYRXXXXXXXXXKNW----VLPEDVVVGIANANRVLRDFVFEELKLATNNFDSVSKMKG 141
           FL+           +     VLPED++V IA+ + V + F F++LK AT NF S S++KG
Sbjct: 293 FLFYKKRSKKVPPVHGKTKSVLPEDLLVEIASVDPVPKVFEFKKLKKATGNFSSKSRIKG 352

Query: 140 SVYRGMLGEEVVAIKKVKEDSWKEVKILTKINHFNLIRLYGVCE 9
            V+R  LG E+VA+KK+K D  +EV IL K+NH NLI+L+GVC+
Sbjct: 353 CVFRAELGREIVAVKKMKVDISEEVNILNKLNHCNLIKLHGVCK 396


>ref|XP_002510333.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223551034|gb|EEF52520.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 637

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 63/160 (39%), Positives = 86/160 (53%), Gaps = 2/160 (1%)
 Frame = -3

Query: 482 PLPAEPSSSQTVIHFS-TIGSPNYTPIATKQKSKKRXXXXXXXXXXXXXXXXXXXXVIFF 306
           PL  EPS+SQT+IH + T  SP        ++SK++                    VI F
Sbjct: 230 PLTTEPSNSQTIIHENPTEVSPPLASPPDNRRSKRKLYEKVGITAACSLLVLSIIVVILF 289

Query: 305 LYRXXXXXXXXXKNWVLP-EDVVVGIANANRVLRDFVFEELKLATNNFDSVSKMKGSVYR 129
           L R          N     ED+ + IA+  +VL+ F  EE+K AT+NF S   +KGS+Y 
Sbjct: 290 LLRKDRRHKFPEINRRREQEDLRLEIASVEQVLKVFGLEEVKKATDNFSSKHIIKGSLYW 349

Query: 128 GMLGEEVVAIKKVKEDSWKEVKILTKINHFNLIRLYGVCE 9
           G    +++AIKK+  D  KEV IL +INHFNLI+L+GVCE
Sbjct: 350 GEFNGQILAIKKMNRDVSKEVNILKRINHFNLIKLHGVCE 389


>emb|CAN64301.1| hypothetical protein VITISV_034921 [Vitis vinifera]
          Length = 416

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 46/84 (54%), Positives = 64/84 (76%)
 Frame = -3

Query: 260 VLPEDVVVGIANANRVLRDFVFEELKLATNNFDSVSKMKGSVYRGMLGEEVVAIKKVKED 81
           VLPED++V IA+ + V + F F++LK AT NF S S++KG V+R  LG E+VA+KK+K D
Sbjct: 185 VLPEDLLVEIASVDPVPKVFEFKKLKKATGNFSSKSRIKGCVFRAELGREIVAVKKMKVD 244

Query: 80  SWKEVKILTKINHFNLIRLYGVCE 9
             +EV IL K+NH NLI+L+GVC+
Sbjct: 245 XSEEVNILNKLNHXNLIKLHGVCK 268


>ref|XP_002533279.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223526904|gb|EEF29111.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 617

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 54/163 (33%), Positives = 86/163 (52%), Gaps = 5/163 (3%)
 Frame = -3

Query: 482 PLPAEPSSSQTVIHFSTIG-SPNYTPIATKQKSKKRXXXXXXXXXXXXXXXXXXXXVIFF 306
           PL  EPSS QT++H+     SP + P+   ++S+K+                    V+  
Sbjct: 232 PLSTEPSSFQTIVHYPPPPYSPPFIPVHPIRRSRKKIHVWVIPVIIVSALPVVLFIVLLL 291

Query: 305 LYRXXXXXXXXXKNWV----LPEDVVVGIANANRVLRDFVFEELKLATNNFDSVSKMKGS 138
             +         K       LP+D +  +A+ +  L+ + FEELK+AT +F + +++  S
Sbjct: 292 RNKKSHLGVQREKEGKNKEELPDDFLDHVAHVDLGLKIYTFEELKVATEDFSTSNRLSDS 351

Query: 137 VYRGMLGEEVVAIKKVKEDSWKEVKILTKINHFNLIRLYGVCE 9
           VYRG++  +V+AIKK+ +D   EV +L KINHFNLI L+  CE
Sbjct: 352 VYRGVISGQVLAIKKMSKDVSNEVTLLRKINHFNLISLHAACE 394


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