BLASTX nr result

ID: Coptis21_contig00039089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039089
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002999074.1| conserved hypothetical protein [Phytophthora...   142   4e-32
ref|XP_003570899.1| PREDICTED: uncharacterized protein LOC100840...   141   5e-32
ref|XP_003566378.1| PREDICTED: uncharacterized protein LOC100833...   141   5e-32
emb|CAE03097.2| OSJNBa0017B10.12 [Oryza sativa Japonica Group]        140   8e-32
gb|ABD64939.1| hypothetical protein 24.t00017 [Brassica oleracea]     140   1e-31

>ref|XP_002999074.1| conserved hypothetical protein [Phytophthora infestans T30-4]
           gi|262111168|gb|EEY69220.1| conserved hypothetical
           protein [Phytophthora infestans T30-4]
          Length = 365

 Score =  142 bits (357), Expect = 4e-32
 Identities = 61/108 (56%), Positives = 80/108 (74%)
 Frame = +2

Query: 2   LAYGTPADLVDDMLHVAEPTVHECMRFFCDAIIRIFGPEYLRKPNAADIQRLLGESEERG 181
           LAYG  AD +D+++ +AE TV E ++ FC  IIR+FGPEYLRKP   D++ LL E+ ERG
Sbjct: 64  LAYGASADQLDELIRMAESTVLETLKLFCKNIIRLFGPEYLRKPTKDDLKILLAENAERG 123

Query: 182 WPGMLGSIDCMHWQWKNCPSGWQGSHTGHVHKPSVILKAVADRETWIW 325
           +PGM+GS+DCMHW WKNCP+ WQG+  G     +VIL+AVA +  WIW
Sbjct: 124 FPGMIGSLDCMHWTWKNCPTAWQGAFQGKEKCSTVILEAVASKSLWIW 171


>ref|XP_003570899.1| PREDICTED: uncharacterized protein LOC100840429 [Brachypodium
           distachyon]
          Length = 443

 Score =  141 bits (356), Expect = 5e-32
 Identities = 62/109 (56%), Positives = 78/109 (71%), Gaps = 1/109 (0%)
 Frame = +2

Query: 2   LAYGTPADLVDDMLHVAEPTVHECMRFFCDAIIRIFGPEYLRKPNAADIQRLLGESEERG 181
           LAYGTPAD +D+ L +AE T+ EC+  FC  +++  GPEYLR+PN  DIQRLL     RG
Sbjct: 138 LAYGTPADAIDENLRIAESTILECLSIFCKGVMQNLGPEYLRRPNNEDIQRLLHIGRARG 197

Query: 182 WPGMLGSIDCMHWQWKNCPSGWQGSHT-GHVHKPSVILKAVADRETWIW 325
           +PGMLGS+DCMHW+WKNCP  WQG  T G     +V+L+AVA  + WIW
Sbjct: 198 FPGMLGSLDCMHWEWKNCPVAWQGQFTRGDQGTSTVMLEAVASHDLWIW 246


>ref|XP_003566378.1| PREDICTED: uncharacterized protein LOC100833375 [Brachypodium
           distachyon]
          Length = 357

 Score =  141 bits (356), Expect = 5e-32
 Identities = 60/108 (55%), Positives = 76/108 (70%)
 Frame = +2

Query: 2   LAYGTPADLVDDMLHVAEPTVHECMRFFCDAIIRIFGPEYLRKPNAADIQRLLGESEERG 181
           L YG  AD  D+ + +   T  + M+ F  AI+ +FG EYLR PN AD  RLL   E RG
Sbjct: 60  LTYGVAADATDEYVRIGGSTALKSMKAFVRAIVEVFGDEYLRSPNEADTARLLAIGESRG 119

Query: 182 WPGMLGSIDCMHWQWKNCPSGWQGSHTGHVHKPSVILKAVADRETWIW 325
           +PGMLGSI+CMHW WKNCPS WQG +TGHVH+P++IL+ VA ++ WIW
Sbjct: 120 FPGMLGSINCMHWGWKNCPSSWQGMYTGHVHEPTIILEPVASQDLWIW 167


>emb|CAE03097.2| OSJNBa0017B10.12 [Oryza sativa Japonica Group]
          Length = 454

 Score =  140 bits (354), Expect = 8e-32
 Identities = 65/109 (59%), Positives = 80/109 (73%), Gaps = 1/109 (0%)
 Frame = +2

Query: 2   LAYGTPADLVDDMLHVAEPTVHECMRFFCDAIIRIFGPEYLRKPNAADIQRLLGESEERG 181
           LAYGT AD++D+ L +AE TV E +  FC  II  FGP+YLR+P A DIQRLL   E RG
Sbjct: 147 LAYGTSADILDENLQIAETTVIESLVNFCKGIIDCFGPKYLRRPTAEDIQRLLHVGEARG 206

Query: 182 WPGMLGSIDCMHWQWKNCPSGWQGSHTGHVH-KPSVILKAVADRETWIW 325
           +PGMLGSIDCMHW+WKNCP  W+G +T   H  P+V+L+AVA  + WIW
Sbjct: 207 FPGMLGSIDCMHWEWKNCPVAWKGQYTRGDHGVPTVMLEAVASHDLWIW 255


>gb|ABD64939.1| hypothetical protein 24.t00017 [Brassica oleracea]
          Length = 442

 Score =  140 bits (353), Expect = 1e-31
 Identities = 59/108 (54%), Positives = 77/108 (71%)
 Frame = +2

Query: 2   LAYGTPADLVDDMLHVAEPTVHECMRFFCDAIIRIFGPEYLRKPNAADIQRLLGESEERG 181
           LAYG  AD VD+ L +   T   C+  F D II +FG EYLR+P  AD+QRLL   E RG
Sbjct: 133 LAYGNAADAVDEYLRLGATTTRSCLEHFVDGIISLFGEEYLRRPTPADLQRLLDIGEYRG 192

Query: 182 WPGMLGSIDCMHWQWKNCPSGWQGSHTGHVHKPSVILKAVADRETWIW 325
           +PGM+GSIDCMHW+WKNCP+ W+G +T  + KP+++L+AVA  + WIW
Sbjct: 193 FPGMVGSIDCMHWEWKNCPTAWKGQYTRGLGKPTIVLEAVASYDLWIW 240


Top