BLASTX nr result

ID: Coptis21_contig00039076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039076
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF27128.1|AC018849_16 unknown protein; 52184-57536 [Arabidop...    96   2e-18
ref|NP_849913.2| Topless-related protein 1 [Arabidopsis thaliana...    96   2e-18
ref|NP_178164.3| Topless-related protein 1 [Arabidopsis thaliana...    96   2e-18
dbj|BAE98958.1| hypothetical protein [Arabidopsis thaliana]            96   2e-18
ref|XP_002283157.1| PREDICTED: topless-related protein 3 [Vitis ...    95   7e-18

>gb|AAF27128.1|AC018849_16 unknown protein; 52184-57536 [Arabidopsis thaliana]
          Length = 1073

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 49/73 (67%), Positives = 58/73 (79%)
 Frame = +2

Query: 89  ERMSNYLSMETHYARSIMLVELKKLIEVDPLFRDKLQFPTLTTSRLRTLVNQSLNWQHKP 268
           E++S Y   +T  AR+IMLVELKKLIE +PLFRDKLQFPTL TSRLRTL+NQSLNWQH+ 
Sbjct: 128 EQLSKY--GDTKSARAIMLVELKKLIEANPLFRDKLQFPTLRTSRLRTLINQSLNWQHQL 185

Query: 269 CKNSRSIQEVSHL 307
           CKN R   ++  L
Sbjct: 186 CKNPRPNPDIKTL 198


>ref|NP_849913.2| Topless-related protein 1 [Arabidopsis thaliana]
           gi|302393805|sp|Q0WV90.3|TPR1_ARATH RecName:
           Full=Topless-related protein 1; AltName: Full=Protein
           MODIFIER OF SNC1 10 gi|332198291|gb|AEE36412.1|
           Topless-related protein 1 [Arabidopsis thaliana]
          Length = 1120

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 49/73 (67%), Positives = 58/73 (79%)
 Frame = +2

Query: 89  ERMSNYLSMETHYARSIMLVELKKLIEVDPLFRDKLQFPTLTTSRLRTLVNQSLNWQHKP 268
           E++S Y   +T  AR+IMLVELKKLIE +PLFRDKLQFPTL TSRLRTL+NQSLNWQH+ 
Sbjct: 128 EQLSKY--GDTKSARAIMLVELKKLIEANPLFRDKLQFPTLRTSRLRTLINQSLNWQHQL 185

Query: 269 CKNSRSIQEVSHL 307
           CKN R   ++  L
Sbjct: 186 CKNPRPNPDIKTL 198


>ref|NP_178164.3| Topless-related protein 1 [Arabidopsis thaliana]
           gi|332198290|gb|AEE36411.1| Topless-related protein 1
           [Arabidopsis thaliana]
          Length = 1119

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 49/73 (67%), Positives = 58/73 (79%)
 Frame = +2

Query: 89  ERMSNYLSMETHYARSIMLVELKKLIEVDPLFRDKLQFPTLTTSRLRTLVNQSLNWQHKP 268
           E++S Y   +T  AR+IMLVELKKLIE +PLFRDKLQFPTL TSRLRTL+NQSLNWQH+ 
Sbjct: 128 EQLSKY--GDTKSARAIMLVELKKLIEANPLFRDKLQFPTLRTSRLRTLINQSLNWQHQL 185

Query: 269 CKNSRSIQEVSHL 307
           CKN R   ++  L
Sbjct: 186 CKNPRPNPDIKTL 198


>dbj|BAE98958.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1119

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 49/73 (67%), Positives = 58/73 (79%)
 Frame = +2

Query: 89  ERMSNYLSMETHYARSIMLVELKKLIEVDPLFRDKLQFPTLTTSRLRTLVNQSLNWQHKP 268
           E++S Y   +T  AR+IMLVELKKLIE +PLFRDKLQFPTL TSRLRTL+NQSLNWQH+ 
Sbjct: 128 EQLSKY--GDTKSARAIMLVELKKLIEANPLFRDKLQFPTLRTSRLRTLINQSLNWQHQL 185

Query: 269 CKNSRSIQEVSHL 307
           CKN R   ++  L
Sbjct: 186 CKNPRPNPDIKTL 198


>ref|XP_002283157.1| PREDICTED: topless-related protein 3 [Vitis vinifera]
           gi|296089734|emb|CBI39553.3| unnamed protein product
           [Vitis vinifera]
          Length = 1132

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 47/77 (61%), Positives = 57/77 (74%)
 Frame = +2

Query: 77  GNYKERMSNYLSMETHYARSIMLVELKKLIEVDPLFRDKLQFPTLTTSRLRTLVNQSLNW 256
           GN++E        +T  ARSIML+ELKKLIE +PLFRDKL FPTL +SRLRTL+NQSLNW
Sbjct: 122 GNFRENEQLSKYGDTKTARSIMLIELKKLIEANPLFRDKLVFPTLKSSRLRTLINQSLNW 181

Query: 257 QHKPCKNSRSIQEVSHL 307
           QH+ CKN R   ++  L
Sbjct: 182 QHQLCKNPRPNPDIKTL 198


Top