BLASTX nr result

ID: Coptis21_contig00039062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039062
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79561.1|AC022464_19 F22G5.37 [Arabidopsis thaliana]              65   6e-09
ref|NP_172209.4| golgi nucleotide sugar transporter 2 [Arabidops...    65   6e-09
ref|XP_004166283.1| PREDICTED: LOW QUALITY PROTEIN: GDP-mannose ...    64   1e-08
dbj|BAM11305.1| unnamed protein product [Oryza sativa Japonica G...    62   6e-08
ref|XP_003552965.1| PREDICTED: GDP-mannose transporter GONST2-li...    61   8e-08

>gb|AAF79561.1|AC022464_19 F22G5.37 [Arabidopsis thaliana]
          Length = 349

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 30/39 (76%), Positives = 36/39 (92%)
 Frame = +3

Query: 3   IPFSIAGLLLFNVPVISPNLFSILFGLFAGVLFARAKMT 119
           +P S+AGL+LFNVP+  PNLFSILFGLFAGV+FARAKM+
Sbjct: 311 VPISLAGLVLFNVPLSLPNLFSILFGLFAGVVFARAKMS 349


>ref|NP_172209.4| golgi nucleotide sugar transporter 2 [Arabidopsis thaliana]
           gi|75146971|sp|Q84L09.1|GONS2_ARATH RecName:
           Full=GDP-mannose transporter GONST2; AltName:
           Full=Protein GOLGI NUCLEOTIDE SUGAR TRANSPORTER 2
           gi|29329819|emb|CAD83086.1| GONST2 Golgi Nucleotide
           sugar transporter [Arabidopsis thaliana]
           gi|332189982|gb|AEE28103.1| golgi nucleotide sugar
           transporter 2 [Arabidopsis thaliana]
          Length = 375

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 30/39 (76%), Positives = 36/39 (92%)
 Frame = +3

Query: 3   IPFSIAGLLLFNVPVISPNLFSILFGLFAGVLFARAKMT 119
           +P S+AGL+LFNVP+  PNLFSILFGLFAGV+FARAKM+
Sbjct: 337 VPISLAGLVLFNVPLSLPNLFSILFGLFAGVVFARAKMS 375


>ref|XP_004166283.1| PREDICTED: LOW QUALITY PROTEIN: GDP-mannose transporter GONST2-like
           [Cucumis sativus]
          Length = 413

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/39 (79%), Positives = 34/39 (87%)
 Frame = +3

Query: 3   IPFSIAGLLLFNVPVISPNLFSILFGLFAGVLFARAKMT 119
           IP SIAG+LLF VP+  PNLFSILFGLFAGV FARAKM+
Sbjct: 370 IPISIAGILLFKVPLSPPNLFSILFGLFAGVFFARAKMS 408


>dbj|BAM11305.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 387

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/39 (71%), Positives = 34/39 (87%)
 Frame = +3

Query: 3   IPFSIAGLLLFNVPVISPNLFSILFGLFAGVLFARAKMT 119
           IP S+AG+LLFNVPV   NLFSI+FGLFAG+ FA+AKM+
Sbjct: 349 IPISVAGILLFNVPVSVENLFSIIFGLFAGIFFAKAKMS 387


>ref|XP_003552965.1| PREDICTED: GDP-mannose transporter GONST2-like [Glycine max]
          Length = 490

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/39 (76%), Positives = 34/39 (87%)
 Frame = +3

Query: 3   IPFSIAGLLLFNVPVISPNLFSILFGLFAGVLFARAKMT 119
           IP SIAG+L+F VP+   NLFSILFGLFAGVLFARAKM+
Sbjct: 452 IPISIAGILVFKVPLSVSNLFSILFGLFAGVLFARAKMS 490


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