BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039061
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_006390090.1| coat protein [Persimmon cryptic virus] gi|38...    73   2e-11
gb|AEJ07891.1| putative coat protein [Pepper cryptic virus 1]          70   1e-10
gb|AEJ07893.1| putative coat protein [Pepper cryptic virus 2]          65   4e-09
ref|YP_002364402.1| hypothetical protein RSCV3_s2gp1 [Raphanus s...    65   6e-09
gb|ACZ54927.1| hypothetical protein [Mulberry cryptic virus 1]         60   2e-07

>ref|YP_006390090.1| coat protein [Persimmon cryptic virus] gi|388877113|emb|CCH50610.1|
           coat protein [Persimmon cryptic virus]
          Length = 415

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 34/98 (34%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
 Frame = -3

Query: 291 YAARVLISHWFIDVYVANREAMKSY-QVSYTEHFRHKEYAQSSNYDCFLMQLHASLRPTN 115
           YA    +S W  D+YV+ RE++K   Q ++ + ++ +++     YD FL  L+  +RPT+
Sbjct: 115 YATACYVSSWCWDLYVSIRESVKKLSQTAFLQQYQTEQFHSQDRYDPFLQHLNTVIRPTH 174

Query: 114 IKGVLENTLYIPIVSSSVDWTNEGNPFNIQDFILDRCL 1
           I G LE++LYIP++++ V W N+ +PF I  + ++  L
Sbjct: 175 IPGGLEDSLYIPLIANHVQWGNQ-SPFGINHYAINESL 211


>gb|AEJ07891.1| putative coat protein [Pepper cryptic virus 1]
          Length = 412

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 40/98 (40%), Positives = 60/98 (61%), Gaps = 4/98 (4%)
 Frame = -3

Query: 291 YAARVLISHWFIDVYVANREAMKSYQ-VSYTEHFRHKEYAQSSNYDCFLMQLHASLRPTN 115
           + ARV IS W  D+Y + REA +S   +++ E + ++    S+ YD FL  L  S++PT+
Sbjct: 100 FVARVYISTWLHDLYCSIREATRSISPLAFNERYSYELLPYSTEYDPFLAFLSMSIKPTH 159

Query: 114 IKGVLENTLYIPIVSSSVDW-TNEG--NPFNIQDFILD 10
           I+   ENTL+IPI+  + DW  NE   NPF I +F L+
Sbjct: 160 IQHTPENTLWIPILCENYDWDRNEANHNPFGITNFTLN 197


>gb|AEJ07893.1| putative coat protein [Pepper cryptic virus 2]
          Length = 430

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
 Frame = -3

Query: 297 WLYAARVLISHWFIDVYVANREAMKSYQ-VSYTEHFRHKEYAQSSNYDCFLMQLHASLRP 121
           W  AA   IS WF D+YV+ R A++     ++T+++          YD  L+ L+A +RP
Sbjct: 110 WENAAHAYISCWFFDLYVSVRNAVEKVSGTAFTQYYHAHAAHILHEYDALLVHLNAIIRP 169

Query: 120 TNIKGVLENTLYIPIVSSSVDWTNEGNPFNIQDFILDR 7
           T+IK  LE+ +YIP ++++++ TN  NPF + +   DR
Sbjct: 170 THIKLALEDCIYIPRIATNMNITNP-NPFGLTEATWDR 206


>ref|YP_002364402.1| hypothetical protein RSCV3_s2gp1 [Raphanus sativus cryptic virus 3]
           gi|217039789|gb|ACJ76982.1| hypothetical protein
           [Raphanus sativus cryptic virus 3]
          Length = 374

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 36/93 (38%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
 Frame = -3

Query: 291 YAARVLISHWFIDVYVANREAMKSYQ-VSYTEHFRHKEYAQSSNYDCFLMQLHASLRPTN 115
           Y A   IS WF D+Y   R+A+KS   ++  E++R      S  YD FL  L A++RPT+
Sbjct: 102 YYACCYISGWFRDLYYHIRKALKSLSGLAELEYYRDPIPQMSFEYDNFLALLGAAIRPTH 161

Query: 114 IKGVLENTLYIPIVSSSVDWTNEGNPFNIQDFI 16
           I G  E+ +Y+P++S + D  N+ NPF I +++
Sbjct: 162 IVGNPEDVMYVPLISEATD-VNQVNPFGINNYV 193


>gb|ACZ54927.1| hypothetical protein [Mulberry cryptic virus 1]
          Length = 324

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/96 (33%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
 Frame = -3

Query: 291 YAARVLISHWFIDVYVANREAMKSYQ-VSYTEHFRHKEYAQSSNYDCFLMQLHASLRPTN 115
           + A   IS WF D++V+ R ++      ++ ++F+++    +  YD FL  L+  ++PT+
Sbjct: 66  FVATNYISAWFWDLHVSIRNSVARISGTAFNQYFQNEVTHVAERYDPFLQHLNNVIKPTH 125

Query: 114 IKGVLENTLYIPIVSSSVDWTNEG-NPFNIQDFILD 10
           I+  LE+TLYIP+VS++++   E  N F + +F LD
Sbjct: 126 IQNSLEDTLYIPLVSTTINLEAENMNIFGMNNFYLD 161