BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039051
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group...    63   3e-08
gb|AAF17675.1|AC009243_2 F28K19.3 [Arabidopsis thaliana]               60   2e-07
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...    60   2e-07
gb|AAO00713.1| retrotransposon protein, putative, unclassified [...    59   4e-07
gb|AAX95129.1| retrotransposon protein, putative, unclassified [...    59   5e-07

>gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|54291856|gb|AAV32224.1| hypothetical protein [Oryza
           sativa Japonica Group]
          Length = 1936

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 27/77 (35%), Positives = 49/77 (63%)
 Frame = -1

Query: 235 SMTMEAWNCRGIGSSTTIRSLKDQILGSNPDIICLAETKASEKKMQLVQKRIKYGGSCFV 56
           +M+  AWNCRG+G++ T++ L+  I  +   ++ L ET+ S +KM  +++++ + G   V
Sbjct: 635 AMSCLAWNCRGLGNTATVQDLRALIQKAGSQLVFLCETRQSVEKMSRLRRKLAFRGFVGV 694

Query: 55  PAVGLKGGLAVFWKEGV 5
            + G  GGLA++W E V
Sbjct: 695 SSEGKSGGLALYWDESV 711


>gb|AAF17675.1|AC009243_2 F28K19.3 [Arabidopsis thaliana]
          Length = 238

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/71 (39%), Positives = 40/71 (56%)
 Frame = -1

Query: 217 WNCRGIGSSTTIRSLKDQILGSNPDIICLAETKASEKKMQLVQKRIKYGGSCFVPAVGLK 38
           WNC+G+G   T+R LK+      PD+ICL+ETK     ++     + +     VP++GL 
Sbjct: 59  WNCQGLGIDLTVRRLKEINRKYLPDVICLSETKQRNDYVRDTCCELGFSNFVMVPSMGLS 118

Query: 37  GGLAVFWKEGV 5
           GGL V WK  V
Sbjct: 119 GGLVVLWKPSV 129


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 25/74 (33%), Positives = 46/74 (62%)
 Frame = -1

Query: 232 MTMEAWNCRGIGSSTTIRSLKDQILGSNPDIICLAETKASEKKMQLVQKRIKYGGSCFVP 53
           M +  WNC+G+G+  T+R L+  +  + PD + ++ETK ++  ++  ++ + + G+  V 
Sbjct: 1   MKILCWNCQGMGNPWTVRQLRRLMASNTPDSLFMSETKVTKNIVEQKKESLGFSGAFGVS 60

Query: 52  AVGLKGGLAVFWKE 11
            VG  GGL +FWKE
Sbjct: 61  CVGRAGGLCMFWKE 74


>gb|AAO00713.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1557

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/79 (35%), Positives = 47/79 (59%)
 Frame = -1

Query: 241 SVSMTMEAWNCRGIGSSTTIRSLKDQILGSNPDIICLAETKASEKKMQLVQKRIKYGGSC 62
           S +M   +WNCRGIG++TT++ L   +  ++   + L ET+    K++ ++ R+   G  
Sbjct: 431 SGAMNCLSWNCRGIGNATTVQELCALVKEASSQFVFLCETRQPVDKIKRLRNRLGLRGFA 490

Query: 61  FVPAVGLKGGLAVFWKEGV 5
            V + G+ GGLA+FW E V
Sbjct: 491 GVSSDGMSGGLALFWHESV 509


>gb|AAX95129.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group] gi|62733115|gb|AAX95232.1|
           retrotransposon protein, putative, unclassified [Oryza
           sativa Japonica Group]
          Length = 1324

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/81 (34%), Positives = 43/81 (53%)
 Frame = -1

Query: 247 VTSVSMTMEAWNCRGIGSSTTIRSLKDQILGSNPDIICLAETKASEKKMQLVQKRIKYGG 68
           +    M + AWNCRG+G+  T+R L +     +PDI+ L+ TK    K+Q  + ++    
Sbjct: 443 INKYPMKIIAWNCRGLGNGPTVRGLLNLQKEDDPDILFLSNTKMDTNKLQCFRWKLGMPN 502

Query: 67  SCFVPAVGLKGGLAVFWKEGV 5
                  G  GGLAVFWK+ +
Sbjct: 503 LVVKDCQGKSGGLAVFWKKEI 523