BLASTX nr result

ID: Coptis21_contig00039041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039041
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275068.1| PREDICTED: uncharacterized protein LOC100262...    89   3e-16
emb|CAN74687.1| hypothetical protein VITISV_020417 [Vitis vinifera]    89   3e-16
ref|XP_002319488.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_002330192.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13
ref|XP_004158725.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    78   9e-13

>ref|XP_002275068.1| PREDICTED: uncharacterized protein LOC100262334 [Vitis vinifera]
          Length = 403

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 48/80 (60%), Positives = 56/80 (70%)
 Frame = +1

Query: 58  MELQNSNNGEPLNSSHLQNPNNVNFFTLNETHRLSEDIDSSCSTPYVSAPSSPGRNNSTH 237
           M LQN NNGEP       + N+      NET+R SEDIDS+CSTPYVSAPSSPGR  +  
Sbjct: 1   MVLQNPNNGEP-------DLNDGEPVDTNETYRFSEDIDSTCSTPYVSAPSSPGRGPT-- 51

Query: 238 SNNGYFFSAPASPMHFILTS 297
              GYF+SAPASPMHF+L+S
Sbjct: 52  ---GYFYSAPASPMHFVLSS 68


>emb|CAN74687.1| hypothetical protein VITISV_020417 [Vitis vinifera]
          Length = 444

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 48/80 (60%), Positives = 56/80 (70%)
 Frame = +1

Query: 58  MELQNSNNGEPLNSSHLQNPNNVNFFTLNETHRLSEDIDSSCSTPYVSAPSSPGRNNSTH 237
           M LQN NNGEP       + N+      NET+R SEDIDS+CSTPYVSAPSSPGR  +  
Sbjct: 1   MVLQNPNNGEP-------DLNDGEPVDTNETYRFSEDIDSTCSTPYVSAPSSPGRGPT-- 51

Query: 238 SNNGYFFSAPASPMHFILTS 297
              GYF+SAPASPMHF+L+S
Sbjct: 52  ---GYFYSAPASPMHFVLSS 68


>ref|XP_002319488.1| predicted protein [Populus trichocarpa] gi|222857864|gb|EEE95411.1|
           predicted protein [Populus trichocarpa]
          Length = 423

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 45/87 (51%), Positives = 55/87 (63%), Gaps = 7/87 (8%)
 Frame = +1

Query: 58  MELQNSN----NGE---PLNSSHLQNPNNVNFFTLNETHRLSEDIDSSCSTPYVSAPSSP 216
           MELQ +N    NG+   P   + L+NP N       E+   +ED DS+CSTPYVSAPSSP
Sbjct: 1   MELQEANSSNKNGQTSTPDPKTDLENPYNGKAL---ESQYFTEDFDSTCSTPYVSAPSSP 57

Query: 217 GRNNSTHSNNGYFFSAPASPMHFILTS 297
           GR  S   N G+F+S PASPMHF +TS
Sbjct: 58  GRPGSGPVNGGFFYSCPASPMHFAITS 84


>ref|XP_002330192.1| predicted protein [Populus trichocarpa] gi|222871648|gb|EEF08779.1|
           predicted protein [Populus trichocarpa]
          Length = 425

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 40/77 (51%), Positives = 47/77 (61%)
 Frame = +1

Query: 67  QNSNNGEPLNSSHLQNPNNVNFFTLNETHRLSEDIDSSCSTPYVSAPSSPGRNNSTHSNN 246
           +N     P   + L NP N       ETH  +ED DS+CSTPYVSAPSSPGR  S   N 
Sbjct: 11  KNGQTSTPDPKTDLGNPYNGKTL---ETHYFTEDFDSACSTPYVSAPSSPGRPGSGPVNG 67

Query: 247 GYFFSAPASPMHFILTS 297
           G+F+S PASP HF +TS
Sbjct: 68  GFFYSCPASPRHFAMTS 84


>ref|XP_004158725.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101206622
           [Cucumis sativus]
          Length = 404

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 44/83 (53%), Positives = 55/83 (66%), Gaps = 4/83 (4%)
 Frame = +1

Query: 58  MELQNSNNG-EPLNS---SHLQNPNNVNFFTLNETHRLSEDIDSSCSTPYVSAPSSPGRN 225
           MELQ SNNG E L+S   + LQ   N   +  +E   + ED+DS+CSTPYVSAPSSPGR 
Sbjct: 5   MELQTSNNGGENLDSGIKTELQETFNGGTYGAHEPQSVFEDVDSACSTPYVSAPSSPGRG 64

Query: 226 NSTHSNNGYFFSAPASPMHFILT 294
                  G+++SAPASPMHF +T
Sbjct: 65  ----PVGGFYYSAPASPMHFAIT 83


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