BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039019
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
sp|Q3EA38.2|FDL48_ARATH RecName: Full=Putative F-box/FBD/LRR-rep...    65   6e-09
ref|XP_002894621.1| F-box family protein [Arabidopsis lyrata sub...    65   6e-09
ref|NP_680683.4| leucine-rich repeat and FBD domain-containing p...    65   6e-09
ref|NP_001154649.1| leucine rich repeat and F-box domain-contain...    64   1e-08

>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 40/102 (39%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
 Frame = +3

Query: 6   CLFACDSLKILKIKMTVSVQIPSSICFSLLKVLHLKFITFSSDQSIQEVSLSCPILEEFV 185
           CLF C++L  L+I M   +++PSSI  S LK+L+L  + F+ D S Q++  S P L E  
Sbjct: 144 CLFNCETLTELEINMPYILKLPSSISLSCLKILNLYEVIFTDDHSTQQL-FSLPNLVELE 202

Query: 186 IYFCTWLKIKTVNIFVPALQKLTI--DCRGS-GELHDCEIII 302
           I+ C W+ +  V+I  P LQ L I   C+ S   L  C + I
Sbjct: 203 IHECNWMNLVAVSISAPKLQSLDIHEPCQSSPASLGGCHVRI 244


>sp|Q3EA38.2|FDL48_ARATH RecName: Full=Putative F-box/FBD/LRR-repeat protein At4g13965
          Length = 427

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 29/83 (34%), Positives = 51/83 (61%)
 Frame = +3

Query: 9   LFACDSLKILKIKMTVSVQIPSSICFSLLKVLHLKFITFSSDQSIQEVSLSCPILEEFVI 188
           L+ C++L  L++K ++ + +PSSIC   L+ LHL ++ F  ++S   +   CP LE  V+
Sbjct: 133 LYNCETLDTLELKYSILMDVPSSICLKSLRTLHLHYVDFKDNESALNLLSGCPNLENLVV 192

Query: 189 YFCTWLKIKTVNIFVPALQKLTI 257
           +   +  +KT  I V +L++LTI
Sbjct: 193 HRYPFSSVKTYTIAVSSLKRLTI 215


>ref|XP_002894621.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297340463|gb|EFH70880.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 424

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 34/91 (37%), Positives = 54/91 (59%)
 Frame = +3

Query: 3   RCLFACDSLKILKIKMTVSVQIPSSICFSLLKVLHLKFITFSSDQSIQEVSLSCPILEEF 182
           R L+ C++L+ LK+ + V + +PSS+    L+ LHL  + F  D+S+  +   CP L++ 
Sbjct: 125 RSLYNCETLETLKLILNVVMDVPSSVSLKSLRTLHLLAVDFKDDESVINLLSGCPNLQDL 184

Query: 183 VIYFCTWLKIKTVNIFVPALQKLTIDCRGSG 275
           V+   +   +KT  I VP+LQKL I   GSG
Sbjct: 185 VMRRNSSSSVKTFTIVVPSLQKLAIH-NGSG 214


>ref|NP_680683.4| leucine-rich repeat and FBD domain-containing protein [Arabidopsis
           thaliana] gi|332657952|gb|AEE83352.1| leucine-rich
           repeat and FBD domain-containing protein [Arabidopsis
           thaliana]
          Length = 376

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 29/83 (34%), Positives = 51/83 (61%)
 Frame = +3

Query: 9   LFACDSLKILKIKMTVSVQIPSSICFSLLKVLHLKFITFSSDQSIQEVSLSCPILEEFVI 188
           L+ C++L  L++K ++ + +PSSIC   L+ LHL ++ F  ++S   +   CP LE  V+
Sbjct: 82  LYNCETLDTLELKYSILMDVPSSICLKSLRTLHLHYVDFKDNESALNLLSGCPNLENLVV 141

Query: 189 YFCTWLKIKTVNIFVPALQKLTI 257
           +   +  +KT  I V +L++LTI
Sbjct: 142 HRYPFSSVKTYTIAVSSLKRLTI 164


>ref|NP_001154649.1| leucine rich repeat and F-box domain-containing protein
           [Arabidopsis thaliana]
           gi|143015252|sp|Q9LJF8.2|FBL47_ARATH RecName:
           Full=F-box/LRR-repeat protein At3g26922
           gi|332643721|gb|AEE77242.1| leucine rich repeat and
           F-box domain-containing protein [Arabidopsis thaliana]
          Length = 306

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/90 (35%), Positives = 51/90 (56%)
 Frame = +3

Query: 9   LFACDSLKILKIKMTVSVQIPSSICFSLLKVLHLKFITFSSDQSIQEVSLSCPILEEFVI 188
           L+ C++L+ L ++  V V +PS  C   L+ L L+ + +  D S+  +   CP LE  V+
Sbjct: 135 LYNCETLESLTLRSWVLVDVPSPACLKSLRTLRLENVDYKYDDSVYNLLSGCPNLENLVV 194

Query: 189 YFCTWLKIKTVNIFVPALQKLTIDCRGSGE 278
           Y    L+++T  I VP+LQ+LTI     GE
Sbjct: 195 YRGNLLEVETFTIAVPSLQRLTIYDDNDGE 224