BLASTX nr result

ID: Coptis21_contig00039017 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039017
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632599.1| PREDICTED: DELLA protein RGA2-like [Vitis vi...    87   2e-15
emb|CAN77496.1| hypothetical protein VITISV_025266 [Vitis vinifera]    87   2e-15
ref|XP_002267556.2| PREDICTED: uncharacterized protein LOC100267...    86   3e-15
ref|XP_002526659.1| transcription factor, putative [Ricinus comm...    70   2e-10
ref|XP_002526658.1| transcription factor, putative [Ricinus comm...    62   4e-08

>ref|XP_003632599.1| PREDICTED: DELLA protein RGA2-like [Vitis vinifera]
          Length = 490

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 38/70 (54%), Positives = 52/70 (74%)
 Frame = -2

Query: 218 RWEEIKEGGSALKSVTELESWKFSRENLFQAKEMVKEGNSMYSVKIEGMDENIMSLHWRG 39
           +WEE+K G S + S+  LE W+ S+E+L +AK+MV+EG S Y VKIEG + N+M L WRG
Sbjct: 421 KWEEMKGGDSNVDSILGLEGWRVSQESLMEAKQMVREGESKYGVKIEGNNMNVMVLEWRG 480

Query: 38  TSIVRVSSWR 9
             +VRVS+WR
Sbjct: 481 APLVRVSAWR 490


>emb|CAN77496.1| hypothetical protein VITISV_025266 [Vitis vinifera]
          Length = 535

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 38/70 (54%), Positives = 52/70 (74%)
 Frame = -2

Query: 218 RWEEIKEGGSALKSVTELESWKFSRENLFQAKEMVKEGNSMYSVKIEGMDENIMSLHWRG 39
           +WEE+K G S + S+  LE W+ S+E+L +AK+MV+EG S Y VKIEG + N+M L WRG
Sbjct: 466 KWEEMKGGDSNVDSILGLEGWRVSQESLMEAKQMVREGESKYGVKIEGNNMNVMVLEWRG 525

Query: 38  TSIVRVSSWR 9
             +VRVS+WR
Sbjct: 526 APLVRVSAWR 535


>ref|XP_002267556.2| PREDICTED: uncharacterized protein LOC100267833 [Vitis vinifera]
          Length = 1435

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 38/70 (54%), Positives = 52/70 (74%)
 Frame = -2

Query: 218 RWEEIKEGGSALKSVTELESWKFSRENLFQAKEMVKEGNSMYSVKIEGMDENIMSLHWRG 39
           +WEE+K G S + S+  LE W+ S+E+L +AK+MV+EG S Y VKIEG + N+M L WRG
Sbjct: 601 KWEEMKGGDSNVDSILGLEGWRVSQESLMEAKQMVREGESKYGVKIEGNNMNMMVLEWRG 660

Query: 38  TSIVRVSSWR 9
             +VRVS+WR
Sbjct: 661 APLVRVSAWR 670


>ref|XP_002526659.1| transcription factor, putative [Ricinus communis]
           gi|223533959|gb|EEF35681.1| transcription factor,
           putative [Ricinus communis]
          Length = 509

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 36/70 (51%), Positives = 47/70 (67%)
 Frame = -2

Query: 218 RWEEIKEGGSALKSVTELESWKFSRENLFQAKEMVKEGNSMYSVKIEGMDENIMSLHWRG 39
           RW E+KE  + L+  T LE W+ S E+L +A+E VKE  S+Y V+I G   N M L WRG
Sbjct: 440 RWMEMKECCN-LQMGTSLEGWRVSNESLEEARETVKEKQSLYKVRIGGEWNNEMILEWRG 498

Query: 38  TSIVRVSSWR 9
           T +VRVS+WR
Sbjct: 499 TQLVRVSAWR 508


>ref|XP_002526658.1| transcription factor, putative [Ricinus communis]
           gi|223533958|gb|EEF35680.1| transcription factor,
           putative [Ricinus communis]
          Length = 517

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/70 (45%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
 Frame = -2

Query: 215 WEEIKEGGSALKSVTELESWKFSRENLFQAKEMVKEGNSMYSVKIEGMDENIMSLHWRGT 36
           W+EI EG S  K+    E  + S  +L +AKEMV+EG++ Y V+IEG + N++ L WRG 
Sbjct: 449 WKEINEG-SDFKTGIGFEGLRVSNNSLMEAKEMVREGDTPYGVRIEGGNSNVLVLDWRGN 507

Query: 35  -SIVRVSSWR 9
             +V VS+WR
Sbjct: 508 MPLVTVSAWR 517


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