BLASTX nr result

ID: Coptis21_contig00039011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039011
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62056.1| hypothetical protein VITISV_027967 [Vitis vinifera]   114   8e-24
ref|XP_002273553.2| PREDICTED: uncharacterized protein LOC100256...    83   3e-14
emb|CBI35396.3| unnamed protein product [Vitis vinifera]               64   2e-08

>emb|CAN62056.1| hypothetical protein VITISV_027967 [Vitis vinifera]
          Length = 346

 Score =  114 bits (285), Expect = 8e-24
 Identities = 62/160 (38%), Positives = 90/160 (56%), Gaps = 5/160 (3%)
 Frame = +3

Query: 18  GQNVAAIPEVAPFPVITPQQGFVRYG-TEYTPVYSGLNNSWSPQLVGNPYQYCCFPYNGM 194
           G+NVA +P +   P   P     R+  +E  PV+SG+N  W  Q+VG+PYQ     Y  M
Sbjct: 46  GENVA-VPVLQSRPGFVPLPASSRHRESELIPVFSGVNTLWGSQVVGSPYQVHGLQYGNM 104

Query: 195 CVPSTVLPNLKQRTEESWNSHNPQQMESLFGHFPGGFKQESVFHASLVPFQAMFQNPVFS 374
           CVP     NLK++ E + + +N   M++ FGH PGGF ++SVFHA  +P QA+FQNP   
Sbjct: 105 CVPVAPWSNLKRKAESTGDLYNRPPMDAFFGHIPGGFGRDSVFHAGFMPIQAVFQNPFMP 164

Query: 375 TSARGPTMNHFQSGLFT----KNQEFSVCTTSQDQRDDNP 482
           T+ R P +++  S   +    K  E +V + SQ  +  NP
Sbjct: 165 TAVRAPPLSYNLSAPLSIEVAKRPEMNVFSASQCPKIGNP 204


>ref|XP_002273553.2| PREDICTED: uncharacterized protein LOC100256682 [Vitis vinifera]
          Length = 301

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 41/104 (39%), Positives = 60/104 (57%), Gaps = 4/104 (3%)
 Frame = +3

Query: 183 YNGMCVPSTVLPNLKQRTEESWNSHNPQQMESLFGHFPGGFKQESVFHASLVPFQAMFQN 362
           Y  MCVP     NLK++ E + + +N   M++ FGH PGGF ++SVFHA  +P QA+FQN
Sbjct: 82  YGNMCVPVAPWSNLKRKAESTGDLYNRPPMDAFFGHIPGGFGRDSVFHAGFMPIQAVFQN 141

Query: 363 PVFSTSARGPTMNHFQSGLFT----KNQEFSVCTTSQDQRDDNP 482
           P   T+ R P +++  S   +    K  E +V + SQ  +  NP
Sbjct: 142 PFMPTAVRAPPLSYNLSAPLSIEVAKRPEMNVFSASQCPKIGNP 185


>emb|CBI35396.3| unnamed protein product [Vitis vinifera]
          Length = 305

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
 Frame = +3

Query: 270 MESLFGHFPGGFKQESVFHASLVPFQAMFQNPVFSTSARGPTMNHFQSGLFT----KNQE 437
           M++ FGH PGGF ++SVFHA  +P QA+FQNP   T+ R P +++  S   +    K  E
Sbjct: 1   MDAFFGHIPGGFGRDSVFHAGFMPIQAVFQNPFMPTAVRAPPLSYNLSAPLSIEVAKRPE 60

Query: 438 FSVCTTSQDQRDDNP 482
            +V + SQ  +  NP
Sbjct: 61  MNVFSASQCPKIGNP 75


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