BLASTX nr result

ID: Coptis21_contig00039003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039003
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266...   123   1e-26
emb|CBI35954.3| unnamed protein product [Vitis vinifera]              119   2e-25
emb|CAN78641.1| hypothetical protein VITISV_031740 [Vitis vinifera]   119   2e-25
ref|XP_004171597.1| PREDICTED: LOW QUALITY PROTEIN: chaperonin C...   116   2e-24
ref|XP_004141682.1| PREDICTED: LOW QUALITY PROTEIN: chaperonin C...   116   2e-24

>ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
          Length = 1753

 Score =  123 bits (309), Expect = 1e-26
 Identities = 69/96 (71%), Positives = 78/96 (81%), Gaps = 7/96 (7%)
 Frame = +1

Query: 10  MYRIAAFFAS-------KKVVPTRNVISRNYAAAKDISFGIGARAAMLQGVTELANAVKV 168
           MYR+AA  AS       KK+V +R + SR+Y A KDI FGIGARAAMLQGVTELA AVKV
Sbjct: 262 MYRVAAKLASTISSASSKKLVYSRVLSSRSYGA-KDIHFGIGARAAMLQGVTELAEAVKV 320

Query: 169 TMGPKGRNVIIEKGKGNPRVTKDGVTVAKSISFKDK 276
           TMGPKGRNVIIEK +G+P+VTKDGVTVAKSI FK+K
Sbjct: 321 TMGPKGRNVIIEKNRGDPKVTKDGVTVAKSIKFKEK 356


>emb|CBI35954.3| unnamed protein product [Vitis vinifera]
          Length = 565

 Score =  119 bits (299), Expect = 2e-25
 Identities = 65/89 (73%), Positives = 71/89 (79%)
 Frame = +1

Query: 10  MYRIAAFFASKKVVPTRNVISRNYAAAKDISFGIGARAAMLQGVTELANAVKVTMGPKGR 189
           MYR+AA  AS     T  V+S     AKDI FGIGARAAMLQGVTELA AVKVTMGPKGR
Sbjct: 1   MYRVAAKLAS-----TIRVLSSRSYGAKDIHFGIGARAAMLQGVTELAEAVKVTMGPKGR 55

Query: 190 NVIIEKGKGNPRVTKDGVTVAKSISFKDK 276
           NVIIEK +G+P+VTKDGVTVAKSI FK+K
Sbjct: 56  NVIIEKNRGDPKVTKDGVTVAKSIKFKEK 84


>emb|CAN78641.1| hypothetical protein VITISV_031740 [Vitis vinifera]
          Length = 579

 Score =  119 bits (299), Expect = 2e-25
 Identities = 65/89 (73%), Positives = 71/89 (79%)
 Frame = +1

Query: 10  MYRIAAFFASKKVVPTRNVISRNYAAAKDISFGIGARAAMLQGVTELANAVKVTMGPKGR 189
           MYR+AA  AS     T  V+S     AKDI FGIGARAAMLQGVTELA AVKVTMGPKGR
Sbjct: 1   MYRVAAKLAS-----TIRVLSSRSYGAKDIHFGIGARAAMLQGVTELAEAVKVTMGPKGR 55

Query: 190 NVIIEKGKGNPRVTKDGVTVAKSISFKDK 276
           NVIIEK +G+P+VTKDGVTVAKSI FK+K
Sbjct: 56  NVIIEKNRGDPKVTKDGVTVAKSIKFKEK 84


>ref|XP_004171597.1| PREDICTED: LOW QUALITY PROTEIN: chaperonin CPN60-like 2,
           mitochondrial-like [Cucumis sativus]
          Length = 842

 Score =  116 bits (291), Expect = 2e-24
 Identities = 65/93 (69%), Positives = 77/93 (82%), Gaps = 3/93 (3%)
 Frame = +1

Query: 7   AMYRIAAFFAS---KKVVPTRNVISRNYAAAKDISFGIGARAAMLQGVTELANAVKVTMG 177
           AMYR+A+  AS   +K+V +R   SR+YAA KDI+FG GARAAMLQGV+E+A AVKVTMG
Sbjct: 272 AMYRLASKLASSTSRKLVCSRVTSSRSYAA-KDINFGDGARAAMLQGVSEVAEAVKVTMG 330

Query: 178 PKGRNVIIEKGKGNPRVTKDGVTVAKSISFKDK 276
           PKGRNVII+   G+P+VTKDGVTVAKSI FKDK
Sbjct: 331 PKGRNVIIDTSFGSPKVTKDGVTVAKSIQFKDK 363


>ref|XP_004141682.1| PREDICTED: LOW QUALITY PROTEIN: chaperonin CPN60-like 2,
           mitochondrial-like [Cucumis sativus]
          Length = 980

 Score =  116 bits (291), Expect = 2e-24
 Identities = 65/93 (69%), Positives = 77/93 (82%), Gaps = 3/93 (3%)
 Frame = +1

Query: 7   AMYRIAAFFAS---KKVVPTRNVISRNYAAAKDISFGIGARAAMLQGVTELANAVKVTMG 177
           AMYR+A+  AS   +K+V +R   SR+YAA KDI+FG GARAAMLQGV+E+A AVKVTMG
Sbjct: 272 AMYRLASKLASSTSRKLVCSRVTSSRSYAA-KDINFGDGARAAMLQGVSEVAEAVKVTMG 330

Query: 178 PKGRNVIIEKGKGNPRVTKDGVTVAKSISFKDK 276
           PKGRNVII+   G+P+VTKDGVTVAKSI FKDK
Sbjct: 331 PKGRNVIIDTSFGSPKVTKDGVTVAKSIQFKDK 363


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