BLASTX nr result

ID: Coptis21_contig00038992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038992
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263941.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    60   1e-07
ref|XP_003623738.1| FAR1-related protein [Medicago truncatula] g...    60   1e-07
emb|CAN71534.1| hypothetical protein VITISV_018182 [Vitis vinifera]    60   1e-07
ref|XP_003581670.1| PREDICTED: protein FAR1-RELATED SEQUENCE 12-...    60   2e-07
gb|ABF95222.1| transposon protein, putative, unclassified [Oryza...    60   2e-07

>ref|XP_002263941.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Vitis vinifera]
          Length = 773

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/93 (33%), Positives = 51/93 (54%)
 Frame = -1

Query: 345 LCSHVLKVPRDVNLRSLPSKYYLKRWSRDAKEGEVFDVRGVPIVVDLDPAFSTRYSELSH 166
           LC H+L V R  N+ +LPS+Y LKRW+R+AK G + + R   ++     + + RY+ L H
Sbjct: 597 LCRHILTVFRVTNVLTLPSRYVLKRWTRNAKSGVILEERANDLLNSSRESLTVRYNNLRH 656

Query: 165 LALS*AIKCARTKELSESGKVELQQMINKIECA 67
            AL    +  +T ++       LQ+  +K+  A
Sbjct: 657 EALKYVDEGVKTIDIYNVAAAALQEAADKVALA 689


>ref|XP_003623738.1| FAR1-related protein [Medicago truncatula]
           gi|355498753|gb|AES79956.1| FAR1-related protein
           [Medicago truncatula]
          Length = 793

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
 Frame = -1

Query: 345 LCSHVLKVPRDVNLRSLPSKYYLKRWSRDAKEGEVFDVRGVPIVVDLDPAFSTRYSELSH 166
           LCSH LKV   +N++ +P  Y LKRW+R+A+ G   D +G+ + +D+   F  RYSEL  
Sbjct: 561 LCSHALKVLDGMNIKLIPEHYILKRWTREARLGSNQDWKGMHVELDMKAHFMKRYSELCP 620

Query: 165 LALS*AIKCARTKE--------LSESGKVELQQMINK 79
            A+  A + + + E          ES K+    + NK
Sbjct: 621 PAIKLANRASESHETYTFLSKVYEESSKIVEDMLANK 657


>emb|CAN71534.1| hypothetical protein VITISV_018182 [Vitis vinifera]
          Length = 737

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/93 (33%), Positives = 51/93 (54%)
 Frame = -1

Query: 345 LCSHVLKVPRDVNLRSLPSKYYLKRWSRDAKEGEVFDVRGVPIVVDLDPAFSTRYSELSH 166
           LC H+L V R  N+ +LPS+Y LKRW+R+AK G + + R   ++     + + RY+ L H
Sbjct: 597 LCRHILTVFRVTNVLTLPSRYVLKRWTRNAKSGVILEERANDLLNSSRESLTVRYNNLRH 656

Query: 165 LALS*AIKCARTKELSESGKVELQQMINKIECA 67
            AL    +  +T ++       LQ+  +K+  A
Sbjct: 657 EALKYVDEGVKTIDIYNVAAAALQEAADKVALA 689


>ref|XP_003581670.1| PREDICTED: protein FAR1-RELATED SEQUENCE 12-like [Brachypodium
           distachyon]
          Length = 997

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/91 (34%), Positives = 48/91 (52%)
 Frame = -1

Query: 345 LCSHVLKVPRDVNLRSLPSKYYLKRWSRDAKEGEVFDVRGVPIVVDLDPAFSTRYSELSH 166
           LC H+LKV    N++ +P++Y+LKRWS+DAK G V ++ G     D   +   RY+ L  
Sbjct: 708 LCCHILKVHELRNVKEIPAQYFLKRWSKDAKMGTVDEISGFNFDTDTGSSVPERYAALCR 767

Query: 165 LALS*AIKCARTKELSESGKVELQQMINKIE 73
           L    A K A   E+      +  Q++  +E
Sbjct: 768 LFYRIAAKAAENVEVFALVASQSDQLVEGVE 798


>gb|ABF95222.1| transposon protein, putative, unclassified [Oryza sativa Japonica
           Group]
          Length = 511

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/74 (43%), Positives = 46/74 (62%)
 Frame = -1

Query: 345 LCSHVLKVPRDVNLRSLPSKYYLKRWSRDAKEGEVFDVRGVPIVVDLDPAFSTRYSELSH 166
           LC H LKV   +N++SLP++Y LKRW+R+A+ G V D +G+ I+ +     S RY  LSH
Sbjct: 330 LCGHALKVLDLMNIKSLPAQYILKRWTREARSGIVTDSKGINIIENPMMEASLRYKFLSH 389

Query: 165 LALS*AIKCARTKE 124
             L+ A + A   E
Sbjct: 390 RFLTLAQQAASYPE 403


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