BLASTX nr result

ID: Coptis21_contig00038967 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038967
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_194116.1| long chain acyl-CoA synthetase 4 [Arabidopsis t...   118   6e-25
ref|XP_003517503.1| PREDICTED: long chain acyl-CoA synthetase 4-...   117   7e-25
ref|XP_002304555.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_004149746.1| PREDICTED: long chain acyl-CoA synthetase 4-...   117   1e-24
emb|CAA64327.1| acyl-CoA synthetase [Brassica napus]                  116   2e-24

>ref|NP_194116.1| long chain acyl-CoA synthetase 4 [Arabidopsis thaliana]
           gi|75213733|sp|Q9T0A0.1|LACS4_ARATH RecName: Full=Long
           chain acyl-CoA synthetase 4
           gi|20805869|gb|AAM28871.1|AF503754_1 long chain acyl-CoA
           synthetase 4 [Arabidopsis thaliana]
           gi|4972089|emb|CAB43885.1| acyl-CoA synthetase-like
           protein [Arabidopsis thaliana]
           gi|7269234|emb|CAB81303.1| acyl-CoA synthetase-like
           protein [Arabidopsis thaliana]
           gi|15146196|gb|AAK83581.1| AT4g23850/T32A16_20
           [Arabidopsis thaliana] gi|332659412|gb|AEE84812.1| long
           chain acyl-CoA synthetase 4 [Arabidopsis thaliana]
          Length = 666

 Score =  118 bits (295), Expect = 6e-25
 Identities = 49/68 (72%), Positives = 61/68 (89%)
 Frame = -3

Query: 204 KYVIEMEKGKESVDGKPSMGPVYRSVFAKDGFPQPVEGLNSCWDIFRISYEKYPENRMLG 25
           KY+ ++E+GKE  DG+PS+GPVYRS+FAKDGFP P+EG++SCWD+FR+S EKYP N MLG
Sbjct: 6   KYIFQVEEGKEGSDGRPSVGPVYRSIFAKDGFPDPIEGMDSCWDVFRMSVEKYPNNPMLG 65

Query: 24  RREIVDGK 1
           RREIVDGK
Sbjct: 66  RREIVDGK 73


>ref|XP_003517503.1| PREDICTED: long chain acyl-CoA synthetase 4-like [Glycine max]
          Length = 662

 Score =  117 bits (294), Expect = 7e-25
 Identities = 50/72 (69%), Positives = 62/72 (86%)
 Frame = -3

Query: 216 MTDMKYVIEMEKGKESVDGKPSMGPVYRSVFAKDGFPQPVEGLNSCWDIFRISYEKYPEN 37
           M   +++IE+EK KE+ +G+PS GPVYRS+FAKDGFP P++GLNSCWD+FR+S EKYP N
Sbjct: 1   MAQKRFIIEVEKAKEASEGRPSRGPVYRSLFAKDGFPAPIQGLNSCWDVFRLSVEKYPSN 60

Query: 36  RMLGRREIVDGK 1
            MLGRREIVDGK
Sbjct: 61  PMLGRREIVDGK 72


>ref|XP_002304555.1| predicted protein [Populus trichocarpa] gi|222841987|gb|EEE79534.1|
           predicted protein [Populus trichocarpa]
          Length = 662

 Score =  117 bits (293), Expect = 1e-24
 Identities = 53/72 (73%), Positives = 61/72 (84%)
 Frame = -3

Query: 216 MTDMKYVIEMEKGKESVDGKPSMGPVYRSVFAKDGFPQPVEGLNSCWDIFRISYEKYPEN 37
           M   KY+IE+EK KE+ DGKPS+GPVYRS+FAKDGFP PV GL SCWD+FR+S EKYP N
Sbjct: 1   MAPRKYLIEVEKAKEAKDGKPSIGPVYRSLFAKDGFPPPVPGLESCWDVFRMSVEKYPNN 60

Query: 36  RMLGRREIVDGK 1
            MLGRREIV+GK
Sbjct: 61  PMLGRREIVNGK 72


>ref|XP_004149746.1| PREDICTED: long chain acyl-CoA synthetase 4-like [Cucumis sativus]
           gi|449505070|ref|XP_004162367.1| PREDICTED: long chain
           acyl-CoA synthetase 4-like [Cucumis sativus]
          Length = 660

 Score =  117 bits (292), Expect = 1e-24
 Identities = 50/72 (69%), Positives = 64/72 (88%)
 Frame = -3

Query: 216 MTDMKYVIEMEKGKESVDGKPSMGPVYRSVFAKDGFPQPVEGLNSCWDIFRISYEKYPEN 37
           M+ MKY+IE+EK K ++DG+PS+GPVYRS+FAKDGFP P++GL+SCWDIFR+S E+ P N
Sbjct: 1   MSQMKYLIEVEKSKSAIDGRPSIGPVYRSIFAKDGFPLPIQGLDSCWDIFRLSVERNPGN 60

Query: 36  RMLGRREIVDGK 1
           RMLG REIV+GK
Sbjct: 61  RMLGHREIVNGK 72


>emb|CAA64327.1| acyl-CoA synthetase [Brassica napus]
          Length = 667

 Score =  116 bits (291), Expect = 2e-24
 Identities = 48/68 (70%), Positives = 62/68 (91%)
 Frame = -3

Query: 204 KYVIEMEKGKESVDGKPSMGPVYRSVFAKDGFPQPVEGLNSCWDIFRISYEKYPENRMLG 25
           K++ ++E+G+E  DG+PS+GPVYRSVFAKDGFP+P+EG++SCWD+FR+S EKYP N MLG
Sbjct: 7   KFIFQVEEGREGSDGRPSVGPVYRSVFAKDGFPEPIEGMDSCWDVFRMSVEKYPNNPMLG 66

Query: 24  RREIVDGK 1
           RREIVDGK
Sbjct: 67  RREIVDGK 74


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