BLASTX nr result

ID: Coptis21_contig00038915 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038915
         (552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528523.1| conserved hypothetical protein [Ricinus comm...   105   5e-21
ref|XP_003631927.1| PREDICTED: uncharacterized protein LOC100854...    88   1e-15
ref|XP_002334939.1| predicted protein [Populus trichocarpa] gi|2...    86   5e-15
ref|XP_003629053.1| hypothetical protein MTR_8g072610 [Medicago ...    79   4e-13
ref|XP_002317632.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13

>ref|XP_002528523.1| conserved hypothetical protein [Ricinus communis]
           gi|223532025|gb|EEF33835.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 127

 Score =  105 bits (262), Expect = 5e-21
 Identities = 60/113 (53%), Positives = 77/113 (68%)
 Frame = +1

Query: 1   GRGFKLNHRRFSVYRLKARFLYLIKSLSRWNWKSSCGQAMGSIKNSIITRSRSNCKRIDS 180
           GRGF+LN +RFSV RL+ARF+YL K LSRW  KSS G A+ S+K S+ +RS    +   S
Sbjct: 21  GRGFRLNCKRFSVQRLRARFVYLFKLLSRW--KSSYGHAVQSLKRSM-SRSSGIKRNTSS 77

Query: 181 RRGLTTDHQRSNFDSGTGYRLRQYGRSNSFYSEAIADCLEFIKRTSVSTDDDE 339
           RR L  +         +  R+R +GRSNSFYSEAIADCLEFIKR+S+S +  +
Sbjct: 78  RRSLVVE-------VSSDCRMRTFGRSNSFYSEAIADCLEFIKRSSISVEQKQ 123


>ref|XP_003631927.1| PREDICTED: uncharacterized protein LOC100854263 [Vitis vinifera]
          Length = 125

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 55/112 (49%), Positives = 69/112 (61%), Gaps = 1/112 (0%)
 Frame = +1

Query: 1   GRGFKLNHRRFSVY-RLKARFLYLIKSLSRWNWKSSCGQAMGSIKNSIITRSRSNCKRID 177
           GRGF+LN +RFSV  R++ R +YL +          CGQA+ S+K  I +RSRS  K  D
Sbjct: 19  GRGFRLNPKRFSVLIRVRVRLMYLFRL---------CGQAVESLKRGI-SRSRSTKKGSD 68

Query: 178 SRRGLTTDHQRSNFDSGTGYRLRQYGRSNSFYSEAIADCLEFIKRTSVSTDD 333
           S R   +    S        R R +GR+NSFYSEAIADCLEFIKR+S+S DD
Sbjct: 69  SSRSRMSLMMESG-----DCRFRSFGRTNSFYSEAIADCLEFIKRSSLSVDD 115


>ref|XP_002334939.1| predicted protein [Populus trichocarpa] gi|222832473|gb|EEE70950.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score = 85.5 bits (210), Expect = 5e-15
 Identities = 55/116 (47%), Positives = 71/116 (61%), Gaps = 4/116 (3%)
 Frame = +1

Query: 4   RGFKLNH-RRFSVYRLKARFLYLIKSLSRWNWKSSCGQAMGSIKNSIITRSRSNCKRI-D 177
           RGF+L + RRFSV R +ARF  L + LSRW  +SS GQA+  +K  +     S  KR   
Sbjct: 29  RGFRLKYPRRFSVQRFRARFFCLFRFLSRW--RSSYGQAVQYLKRGM--GRDSGIKRCGS 84

Query: 178 SRRGLTTDHQRSNF--DSGTGYRLRQYGRSNSFYSEAIADCLEFIKRTSVSTDDDE 339
           S+R L  D    ++       Y  R +GRSNSFYSEAIADCLEFIKR+S+S +  +
Sbjct: 85  SKRVLVMDATSCHYMEKGDEHYSCRSFGRSNSFYSEAIADCLEFIKRSSISVEQKQ 140


>ref|XP_003629053.1| hypothetical protein MTR_8g072610 [Medicago truncatula]
           gi|355523075|gb|AET03529.1| hypothetical protein
           MTR_8g072610 [Medicago truncatula]
          Length = 125

 Score = 79.3 bits (194), Expect = 4e-13
 Identities = 48/110 (43%), Positives = 64/110 (58%)
 Frame = +1

Query: 4   RGFKLNHRRFSVYRLKARFLYLIKSLSRWNWKSSCGQAMGSIKNSIITRSRSNCKRIDSR 183
           +GF+LN R+F V RL+ RF + ++  +  N K S G A+  +K  +  R     +   SR
Sbjct: 15  KGFRLNPRKFYVLRLRKRFNFFLRLFN--NLKLSYGDALQMLKK-VFCRKIGFKRNNSSR 71

Query: 184 RGLTTDHQRSNFDSGTGYRLRQYGRSNSFYSEAIADCLEFIKRTSVSTDD 333
           R L  D +    D     R   YGRSNSFY+EAI DCLEFIKRTS+S+ D
Sbjct: 72  RSLVRDEEVKGHDDYWKMR-SSYGRSNSFYAEAIEDCLEFIKRTSISSKD 120


>ref|XP_002317632.1| predicted protein [Populus trichocarpa] gi|222860697|gb|EEE98244.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score = 79.0 bits (193), Expect = 5e-13
 Identities = 53/118 (44%), Positives = 68/118 (57%), Gaps = 6/118 (5%)
 Frame = +1

Query: 4   RGFKLNH-RRFSVYRLKARFLYLIKSLSRWNWKSSCGQAMGSIKNSIITRSRSNCKRIDS 180
           RGF+L + RRFSV RL+AR            W+SS G+A+  +K  +  R+ S  +R  S
Sbjct: 23  RGFRLKYPRRFSVQRLRAR------------WRSSYGRAVQYLKRGV-NRNSSIIERCGS 69

Query: 181 R-RGLTTD----HQRSNFDSGTGYRLRQYGRSNSFYSEAIADCLEFIKRTSVSTDDDE 339
             RG   D    H     D    YR R +GRSNSFYSEAIADCLEFIKR+S+S +  +
Sbjct: 70  NERGFMMDATSCHYMGKVDDQ--YRFRSFGRSNSFYSEAIADCLEFIKRSSISVEQKQ 125


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