BLASTX nr result
ID: Coptis21_contig00038915
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00038915 (552 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002528523.1| conserved hypothetical protein [Ricinus comm... 105 5e-21 ref|XP_003631927.1| PREDICTED: uncharacterized protein LOC100854... 88 1e-15 ref|XP_002334939.1| predicted protein [Populus trichocarpa] gi|2... 86 5e-15 ref|XP_003629053.1| hypothetical protein MTR_8g072610 [Medicago ... 79 4e-13 ref|XP_002317632.1| predicted protein [Populus trichocarpa] gi|2... 79 5e-13 >ref|XP_002528523.1| conserved hypothetical protein [Ricinus communis] gi|223532025|gb|EEF33835.1| conserved hypothetical protein [Ricinus communis] Length = 127 Score = 105 bits (262), Expect = 5e-21 Identities = 60/113 (53%), Positives = 77/113 (68%) Frame = +1 Query: 1 GRGFKLNHRRFSVYRLKARFLYLIKSLSRWNWKSSCGQAMGSIKNSIITRSRSNCKRIDS 180 GRGF+LN +RFSV RL+ARF+YL K LSRW KSS G A+ S+K S+ +RS + S Sbjct: 21 GRGFRLNCKRFSVQRLRARFVYLFKLLSRW--KSSYGHAVQSLKRSM-SRSSGIKRNTSS 77 Query: 181 RRGLTTDHQRSNFDSGTGYRLRQYGRSNSFYSEAIADCLEFIKRTSVSTDDDE 339 RR L + + R+R +GRSNSFYSEAIADCLEFIKR+S+S + + Sbjct: 78 RRSLVVE-------VSSDCRMRTFGRSNSFYSEAIADCLEFIKRSSISVEQKQ 123 >ref|XP_003631927.1| PREDICTED: uncharacterized protein LOC100854263 [Vitis vinifera] Length = 125 Score = 87.8 bits (216), Expect = 1e-15 Identities = 55/112 (49%), Positives = 69/112 (61%), Gaps = 1/112 (0%) Frame = +1 Query: 1 GRGFKLNHRRFSVY-RLKARFLYLIKSLSRWNWKSSCGQAMGSIKNSIITRSRSNCKRID 177 GRGF+LN +RFSV R++ R +YL + CGQA+ S+K I +RSRS K D Sbjct: 19 GRGFRLNPKRFSVLIRVRVRLMYLFRL---------CGQAVESLKRGI-SRSRSTKKGSD 68 Query: 178 SRRGLTTDHQRSNFDSGTGYRLRQYGRSNSFYSEAIADCLEFIKRTSVSTDD 333 S R + S R R +GR+NSFYSEAIADCLEFIKR+S+S DD Sbjct: 69 SSRSRMSLMMESG-----DCRFRSFGRTNSFYSEAIADCLEFIKRSSLSVDD 115 >ref|XP_002334939.1| predicted protein [Populus trichocarpa] gi|222832473|gb|EEE70950.1| predicted protein [Populus trichocarpa] Length = 144 Score = 85.5 bits (210), Expect = 5e-15 Identities = 55/116 (47%), Positives = 71/116 (61%), Gaps = 4/116 (3%) Frame = +1 Query: 4 RGFKLNH-RRFSVYRLKARFLYLIKSLSRWNWKSSCGQAMGSIKNSIITRSRSNCKRI-D 177 RGF+L + RRFSV R +ARF L + LSRW +SS GQA+ +K + S KR Sbjct: 29 RGFRLKYPRRFSVQRFRARFFCLFRFLSRW--RSSYGQAVQYLKRGM--GRDSGIKRCGS 84 Query: 178 SRRGLTTDHQRSNF--DSGTGYRLRQYGRSNSFYSEAIADCLEFIKRTSVSTDDDE 339 S+R L D ++ Y R +GRSNSFYSEAIADCLEFIKR+S+S + + Sbjct: 85 SKRVLVMDATSCHYMEKGDEHYSCRSFGRSNSFYSEAIADCLEFIKRSSISVEQKQ 140 >ref|XP_003629053.1| hypothetical protein MTR_8g072610 [Medicago truncatula] gi|355523075|gb|AET03529.1| hypothetical protein MTR_8g072610 [Medicago truncatula] Length = 125 Score = 79.3 bits (194), Expect = 4e-13 Identities = 48/110 (43%), Positives = 64/110 (58%) Frame = +1 Query: 4 RGFKLNHRRFSVYRLKARFLYLIKSLSRWNWKSSCGQAMGSIKNSIITRSRSNCKRIDSR 183 +GF+LN R+F V RL+ RF + ++ + N K S G A+ +K + R + SR Sbjct: 15 KGFRLNPRKFYVLRLRKRFNFFLRLFN--NLKLSYGDALQMLKK-VFCRKIGFKRNNSSR 71 Query: 184 RGLTTDHQRSNFDSGTGYRLRQYGRSNSFYSEAIADCLEFIKRTSVSTDD 333 R L D + D R YGRSNSFY+EAI DCLEFIKRTS+S+ D Sbjct: 72 RSLVRDEEVKGHDDYWKMR-SSYGRSNSFYAEAIEDCLEFIKRTSISSKD 120 >ref|XP_002317632.1| predicted protein [Populus trichocarpa] gi|222860697|gb|EEE98244.1| predicted protein [Populus trichocarpa] Length = 129 Score = 79.0 bits (193), Expect = 5e-13 Identities = 53/118 (44%), Positives = 68/118 (57%), Gaps = 6/118 (5%) Frame = +1 Query: 4 RGFKLNH-RRFSVYRLKARFLYLIKSLSRWNWKSSCGQAMGSIKNSIITRSRSNCKRIDS 180 RGF+L + RRFSV RL+AR W+SS G+A+ +K + R+ S +R S Sbjct: 23 RGFRLKYPRRFSVQRLRAR------------WRSSYGRAVQYLKRGV-NRNSSIIERCGS 69 Query: 181 R-RGLTTD----HQRSNFDSGTGYRLRQYGRSNSFYSEAIADCLEFIKRTSVSTDDDE 339 RG D H D YR R +GRSNSFYSEAIADCLEFIKR+S+S + + Sbjct: 70 NERGFMMDATSCHYMGKVDDQ--YRFRSFGRSNSFYSEAIADCLEFIKRSSISVEQKQ 125