BLASTX nr result
ID: Coptis21_contig00038872
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00038872 (384 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002531279.1| Prenylated Rab acceptor protein, putative [R... 94 2e-17 emb|CAN73850.1| hypothetical protein VITISV_021777 [Vitis vinifera] 92 3e-17 ref|XP_002328337.1| predicted protein [Populus trichocarpa] gi|2... 92 6e-17 ref|XP_002264376.1| PREDICTED: PRA1 family protein E [Vitis vini... 91 7e-17 ref|XP_004156493.1| PREDICTED: PRA1 family protein E-like [Cucum... 84 1e-14 >ref|XP_002531279.1| Prenylated Rab acceptor protein, putative [Ricinus communis] gi|223529112|gb|EEF31092.1| Prenylated Rab acceptor protein, putative [Ricinus communis] Length = 216 Score = 93.6 bits (231), Expect = 2e-17 Identities = 48/99 (48%), Positives = 62/99 (62%), Gaps = 13/99 (13%) Frame = -2 Query: 308 YGTIPTASTSTST-------------LQFITNAKEKGQSIISTRRPWRELLDPSAFSRPY 168 YGTIP +T+T+T L FI+ A QS+I+TRRPW+ELL+PS+FS P Sbjct: 10 YGTIPATTTTTTTTHFSQPLPTTATSLTFISRATSATQSVIATRRPWKELLNPSSFSCPC 69 Query: 167 NYNEAMTRIKTNVYHFRVNYTXXXXXXXXXXXLWHPISM 51 NY+EAM+R+K NV +FRVNY LWHP+SM Sbjct: 70 NYSEAMSRVKYNVNYFRVNYAMVVLSVLFLSLLWHPVSM 108 >emb|CAN73850.1| hypothetical protein VITISV_021777 [Vitis vinifera] Length = 206 Score = 92.4 bits (228), Expect = 3e-17 Identities = 50/100 (50%), Positives = 64/100 (64%), Gaps = 6/100 (6%) Frame = -2 Query: 332 MSKPSQPNYGTIPTAST---STSTLQ---FITNAKEKGQSIISTRRPWRELLDPSAFSRP 171 MS S YGT+P AS S+ST + FI+ A ++ Q++++TRRPWRE LD SA SRP Sbjct: 1 MSLKSPAGYGTLPNASPAVPSSSTSEQFTFISRATQRTQTLMATRRPWREFLDYSALSRP 60 Query: 170 YNYNEAMTRIKTNVYHFRVNYTXXXXXXXXXXXLWHPISM 51 +NY++AM RIK NV +FRVNY LWHP SM Sbjct: 61 HNYSDAMARIKRNVNYFRVNYAMVMLFILFVSLLWHPTSM 100 >ref|XP_002328337.1| predicted protein [Populus trichocarpa] gi|222838052|gb|EEE76417.1| predicted protein [Populus trichocarpa] Length = 212 Score = 91.7 bits (226), Expect = 6e-17 Identities = 48/105 (45%), Positives = 64/105 (60%), Gaps = 11/105 (10%) Frame = -2 Query: 332 MSKPSQPNYGTIPTASTSTST-----------LQFITNAKEKGQSIISTRRPWRELLDPS 186 MS+ +Q YGTIPT ++T+T L FI+ Q++I+TRRPW+EL+ S Sbjct: 1 MSRKAQAGYGTIPTTISATTTTTTKSPQSPTTLTFISRVSTSTQTLIATRRPWQELIKLS 60 Query: 185 AFSRPYNYNEAMTRIKTNVYHFRVNYTXXXXXXXXXXXLWHPISM 51 +F RP NYN+A++RIK NV +FRVNY LWHPISM Sbjct: 61 SFIRPNNYNDAISRIKFNVNYFRVNYAMIFLAILFLSLLWHPISM 105 >ref|XP_002264376.1| PREDICTED: PRA1 family protein E [Vitis vinifera] Length = 206 Score = 91.3 bits (225), Expect = 7e-17 Identities = 49/100 (49%), Positives = 63/100 (63%), Gaps = 6/100 (6%) Frame = -2 Query: 332 MSKPSQPNYGTIPTAST---STSTLQ---FITNAKEKGQSIISTRRPWRELLDPSAFSRP 171 MS S YGT+P AS S+ST + FI+ A ++ Q++++TRRPWRE LD S SRP Sbjct: 1 MSLKSPAGYGTLPNASAAVPSSSTSEQFTFISRATQRTQTLMATRRPWREFLDYSVLSRP 60 Query: 170 YNYNEAMTRIKTNVYHFRVNYTXXXXXXXXXXXLWHPISM 51 +NY++AM RIK NV +FRVNY LWHP SM Sbjct: 61 HNYSDAMARIKRNVNYFRVNYAMVMLFILFVSLLWHPTSM 100 >ref|XP_004156493.1| PREDICTED: PRA1 family protein E-like [Cucumis sativus] Length = 213 Score = 84.0 bits (206), Expect = 1e-14 Identities = 46/96 (47%), Positives = 58/96 (60%), Gaps = 5/96 (5%) Frame = -2 Query: 323 PSQPNYGTIPTASTST-----STLQFITNAKEKGQSIISTRRPWRELLDPSAFSRPYNYN 159 PSQ TIPT S+ S+ FI AK QS+I+T+RPWREL D SAFS P++Y+ Sbjct: 14 PSQAA-ATIPTTSSGAPPSFPSSSSFIERAKTTTQSLIATQRPWRELFDFSAFSLPFSYD 72 Query: 158 EAMTRIKTNVYHFRVNYTXXXXXXXXXXXLWHPISM 51 +AM RI+ NV +FRVNY WHPIS+ Sbjct: 73 DAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISI 108