BLASTX nr result

ID: Coptis21_contig00038843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038843
         (734 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135692.1| PREDICTED: uncharacterized protein LOC101205...   315   8e-84
ref|XP_002514171.1| conserved hypothetical protein [Ricinus comm...   304   1e-80
ref|XP_002321101.1| predicted protein [Populus trichocarpa] gi|2...   303   2e-80
emb|CBI27953.3| unnamed protein product [Vitis vinifera]              298   6e-79
ref|XP_002279951.1| PREDICTED: uncharacterized protein LOC100257...   298   6e-79

>ref|XP_004135692.1| PREDICTED: uncharacterized protein LOC101205319 [Cucumis sativus]
           gi|449489853|ref|XP_004158438.1| PREDICTED:
           uncharacterized protein LOC101230342 [Cucumis sativus]
          Length = 294

 Score =  315 bits (806), Expect = 8e-84
 Identities = 148/173 (85%), Positives = 161/173 (93%)
 Frame = +1

Query: 1   VEERIRKKRNKILQPKTGSATPVKVTFNKFDFSNSYVWFEFYNAPLPNDISIICDTIRSW 180
           +EER+RKKRNKILQPKTGSA PVKVTFNKFDFSNSY+WFEFYN PL  DI++ICDTIRSW
Sbjct: 122 MEERLRKKRNKILQPKTGSAVPVKVTFNKFDFSNSYIWFEFYNTPLAKDITLICDTIRSW 181

Query: 181 HIIGRLGGCNSMNMQLSQASLDKKPSYDPIKGANVTPTTFYNIGDFEVQENLGRIWMDIG 360
           HIIGRLGGCNSMNMQLSQ+ LDK+PSYD I+GANV PTTFYNIGDFEVQ+NL RIW+DIG
Sbjct: 182 HIIGRLGGCNSMNMQLSQSPLDKRPSYDAIQGANVNPTTFYNIGDFEVQDNLARIWVDIG 241

Query: 361 TSEPLLLDVLINALTQISSDYVGIKQLVFGGSEFESWKESMTSEAAGYSVHKI 519
           TSEPLLLDVLINAL QISSDYVGIKQLVFGGSEFE+WKE +T+E AGYS HKI
Sbjct: 242 TSEPLLLDVLINALIQISSDYVGIKQLVFGGSEFENWKEDLTTEDAGYSTHKI 294


>ref|XP_002514171.1| conserved hypothetical protein [Ricinus communis]
           gi|223546627|gb|EEF48125.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 300

 Score =  304 bits (779), Expect = 1e-80
 Identities = 139/173 (80%), Positives = 162/173 (93%)
 Frame = +1

Query: 1   VEERIRKKRNKILQPKTGSATPVKVTFNKFDFSNSYVWFEFYNAPLPNDISIICDTIRSW 180
           +E+R+RKKR+K++Q KTGSATP+KV+FNKFDFSNSY+WFEFYNAPL  D+++ICDTIRSW
Sbjct: 128 MEDRLRKKRHKVVQTKTGSATPMKVSFNKFDFSNSYIWFEFYNAPLEKDVTLICDTIRSW 187

Query: 181 HIIGRLGGCNSMNMQLSQASLDKKPSYDPIKGANVTPTTFYNIGDFEVQENLGRIWMDIG 360
           HIIGRLGGCNSMNMQLSQ++ DK+P+YD I+GANVTP TFYNIGD E+Q+NL RIWMDIG
Sbjct: 188 HIIGRLGGCNSMNMQLSQSTFDKRPNYDAIQGANVTPATFYNIGDLEIQDNLARIWMDIG 247

Query: 361 TSEPLLLDVLINALTQISSDYVGIKQLVFGGSEFESWKESMTSEAAGYSVHKI 519
           TSEPLLLDV INALTQISSDYVGIKQLVFGGSEFE+WKE++TSE AG S+HKI
Sbjct: 248 TSEPLLLDVFINALTQISSDYVGIKQLVFGGSEFENWKENLTSEDAGCSIHKI 300


>ref|XP_002321101.1| predicted protein [Populus trichocarpa] gi|222861874|gb|EEE99416.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score =  303 bits (777), Expect = 2e-80
 Identities = 138/173 (79%), Positives = 161/173 (93%)
 Frame = +1

Query: 1   VEERIRKKRNKILQPKTGSATPVKVTFNKFDFSNSYVWFEFYNAPLPNDISIICDTIRSW 180
           +EER+R+K+NKIL  KTGSA P+KVTFNKF FSNSY+WFEFYNAPL ND+S+ICDT RSW
Sbjct: 30  MEERLRRKKNKILHAKTGSAKPMKVTFNKFGFSNSYIWFEFYNAPLENDVSLICDTFRSW 89

Query: 181 HIIGRLGGCNSMNMQLSQASLDKKPSYDPIKGANVTPTTFYNIGDFEVQENLGRIWMDIG 360
           HI+GRLGGCNSMNMQLSQ++ +K+P+YD I+GANVTP TFYNIGDFE+Q+NL RIW+DIG
Sbjct: 90  HIVGRLGGCNSMNMQLSQSTFEKRPNYDAIQGANVTPATFYNIGDFEIQDNLARIWVDIG 149

Query: 361 TSEPLLLDVLINALTQISSDYVGIKQLVFGGSEFESWKESMTSEAAGYSVHKI 519
           T+EPLLLD LINALTQISSDYVGIK+LVFGGSEFE+WKE++TSE AGYSVHKI
Sbjct: 150 TAEPLLLDTLINALTQISSDYVGIKELVFGGSEFENWKENLTSEYAGYSVHKI 202


>emb|CBI27953.3| unnamed protein product [Vitis vinifera]
          Length = 199

 Score =  298 bits (764), Expect = 6e-79
 Identities = 137/173 (79%), Positives = 157/173 (90%)
 Frame = +1

Query: 1   VEERIRKKRNKILQPKTGSATPVKVTFNKFDFSNSYVWFEFYNAPLPNDISIICDTIRSW 180
           +EER+R+KRNKIL  KTGSA P+KVTFNKFDFSN+Y+WFEFYN PL  DIS+ICD +RSW
Sbjct: 27  MEERLRRKRNKILHTKTGSALPMKVTFNKFDFSNTYIWFEFYNTPLAKDISLICDALRSW 86

Query: 181 HIIGRLGGCNSMNMQLSQASLDKKPSYDPIKGANVTPTTFYNIGDFEVQENLGRIWMDIG 360
           HI+GRLGGCNS+NMQLSQ+  DK+PSYD I+GANV PTTFYNIGD E+Q+NL RIW+DIG
Sbjct: 87  HIVGRLGGCNSLNMQLSQSPFDKRPSYDAIQGANVNPTTFYNIGDLEIQDNLARIWVDIG 146

Query: 361 TSEPLLLDVLINALTQISSDYVGIKQLVFGGSEFESWKESMTSEAAGYSVHKI 519
           TSEPLLLD+LINALTQISSDYVGIKQLVFGG EFE+WKE++TSE AG SVHKI
Sbjct: 147 TSEPLLLDILINALTQISSDYVGIKQLVFGGDEFENWKENLTSEHAGCSVHKI 199


>ref|XP_002279951.1| PREDICTED: uncharacterized protein LOC100257820 [Vitis vinifera]
          Length = 357

 Score =  298 bits (764), Expect = 6e-79
 Identities = 137/173 (79%), Positives = 157/173 (90%)
 Frame = +1

Query: 1   VEERIRKKRNKILQPKTGSATPVKVTFNKFDFSNSYVWFEFYNAPLPNDISIICDTIRSW 180
           +EER+R+KRNKIL  KTGSA P+KVTFNKFDFSN+Y+WFEFYN PL  DIS+ICD +RSW
Sbjct: 185 MEERLRRKRNKILHTKTGSALPMKVTFNKFDFSNTYIWFEFYNTPLAKDISLICDALRSW 244

Query: 181 HIIGRLGGCNSMNMQLSQASLDKKPSYDPIKGANVTPTTFYNIGDFEVQENLGRIWMDIG 360
           HI+GRLGGCNS+NMQLSQ+  DK+PSYD I+GANV PTTFYNIGD E+Q+NL RIW+DIG
Sbjct: 245 HIVGRLGGCNSLNMQLSQSPFDKRPSYDAIQGANVNPTTFYNIGDLEIQDNLARIWVDIG 304

Query: 361 TSEPLLLDVLINALTQISSDYVGIKQLVFGGSEFESWKESMTSEAAGYSVHKI 519
           TSEPLLLD+LINALTQISSDYVGIKQLVFGG EFE+WKE++TSE AG SVHKI
Sbjct: 305 TSEPLLLDILINALTQISSDYVGIKQLVFGGDEFENWKENLTSEHAGCSVHKI 357


Top