BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038701
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    79   4e-13
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    79   4e-13
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    71   1e-10
ref|XP_002510612.1| conserved hypothetical protein [Ricinus comm...    68   7e-10

>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 43/87 (49%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
 Frame = +3

Query: 45  KTKTFAVFKLDVSSDIPQWVKVESIGDQMIFLGRNLSISLSAKGIPGFKGDCIYFTEDY- 221
           KT  F VFKLD++   P+W +V S+GD M+F+G N S++LSA G+ G  GDCIY+T+DY 
Sbjct: 286 KTARFEVFKLDLNG--PRWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTDDYS 343

Query: 222 RRYFSDRYGSHCSDNGIFYLDNGRIEP 302
              +    G H  D GIF L +G IEP
Sbjct: 344 ANNYDGHIGEH--DLGIFKLSDGSIEP 368


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 41/86 (47%), Positives = 56/86 (65%)
 Frame = +3

Query: 45  KTKTFAVFKLDVSSDIPQWVKVESIGDQMIFLGRNLSISLSAKGIPGFKGDCIYFTEDYR 224
           +T  F V +LD+ +  P+W  V S+GD+ +FLG NLS+SLS+   PG KG+CIY+T+DY 
Sbjct: 286 RTTRFQVCRLDLKA--PRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYS 343

Query: 225 RYFSDRYGSHCSDNGIFYLDNGRIEP 302
               D  G    D GIF L++G IEP
Sbjct: 344 EDNYDGIGGE-QDLGIFNLEDGSIEP 368


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 42/86 (48%), Positives = 55/86 (63%)
 Frame = +3

Query: 45  KTKTFAVFKLDVSSDIPQWVKVESIGDQMIFLGRNLSISLSAKGIPGFKGDCIYFTEDYR 224
           +T  F V +LD  S  P+W  V S+GD+ +FLG NLS+SLS+   PG KG+CIY+T+DY 
Sbjct: 286 RTTRFQVCRLD--SKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYS 343

Query: 225 RYFSDRYGSHCSDNGIFYLDNGRIEP 302
               D  G    D GIF L++G IEP
Sbjct: 344 EDNYDGIGGE-QDLGIFNLEDGSIEP 368


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
 Frame = +3

Query: 3   YRFRHLCHAQFHYKKTKTFAVFKLDVSSDIPQWVKVESIGDQMIFLGRNLSISLSAKGIP 182
           Y F H         +T  F VF+LD +   PQW+++ ++GD+ +F+G N S+SLSA    
Sbjct: 277 YEFDHPDMEPHLIYRTIRFEVFRLDWNG--PQWLRMSTLGDKALFIGENSSLSLSATDFS 334

Query: 183 GFKGDCIYFTEDY-RRYFSDRYGSHCSDNGIFYLDNGRIEP 302
           G  G+CIY+T+DY    +   +G H  D GIF L +  IEP
Sbjct: 335 GCMGNCIYYTDDYLDANYDGHFGDH--DLGIFKLCDETIEP 373


>ref|XP_002510612.1| conserved hypothetical protein [Ricinus communis]
           gi|223551313|gb|EEF52799.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 402

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 38/84 (45%), Positives = 52/84 (61%)
 Frame = +3

Query: 45  KTKTFAVFKLDVSSDIPQWVKVESIGDQMIFLGRNLSISLSAKGIPGFKGDCIYFTEDYR 224
           KT+ F ++KLD       W K ES+GD+M+FLG N S+S+SA      KG+CIYFT+DY 
Sbjct: 280 KTERFEIYKLDDGG----WKKKESLGDKMLFLGGNGSLSISALDYSKCKGNCIYFTDDYI 335

Query: 225 RYFSDRYGSHCSDNGIFYLDNGRI 296
           R   D Y     D GI+ +++G I
Sbjct: 336 RLCKD-YVWEGHDYGIYDIEDGNI 358