BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038700
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330417.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]               72   4e-11
gb|ACN32036.1| unknown [Zea mays]                                      61   1e-07
gb|ACL54615.1| unknown [Zea mays]                                      61   1e-07
ref|XP_002331884.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_002330417.1| predicted protein [Populus trichocarpa] gi|222871802|gb|EEF08933.1|
           predicted protein [Populus trichocarpa]
          Length = 231

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 42/59 (71%), Positives = 51/59 (86%)
 Frame = -2

Query: 297 GAMTTEVDPEFAAWNQRDQMILSWINSSLTPSVLSTGARCTSSRDTWLSLEKRYASHSQ 121
           G +TTEVDP +A W+Q+DQMILSWIN+SL+P+VLST AR TSS+ TW SLEKRYAS S+
Sbjct: 64  GTITTEVDPRYATWHQQDQMILSWINNSLSPTVLSTVARFTSSQATWSSLEKRYASQSK 122


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/59 (57%), Positives = 42/59 (71%)
 Frame = -2

Query: 297 GAMTTEVDPEFAAWNQRDQMILSWINSSLTPSVLSTGARCTSSRDTWLSLEKRYASHSQ 121
           G +T +V+P+F  W  +DQM+LSWIN SLTP VLST AR TS   TW +L  R+AS SQ
Sbjct: 62  GQLTDQVNPDFEPWILQDQMVLSWINGSLTPKVLSTVARSTSLHATWTALATRFASQSQ 120


>gb|ACN32036.1| unknown [Zea mays]
          Length = 376

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
 Frame = -2

Query: 300 TGAMTTEVDPEFAAWNQRDQMILSWINSSLTPSVLSTGARCTSSRDTWLSLEKRYASHSQ 121
           +G  T  ++PEF +W  +DQ++LS INSSL+  VL+T    T++R  W +LE+ YAS S+
Sbjct: 74  SGGRTIAINPEFTSWYHQDQLVLSVINSSLSEEVLATVVDATTARGAWSTLERMYASSSR 133

Query: 120 -RFSADRMKMVS 88
            R    RM++ +
Sbjct: 134 ARIMQIRMQLAT 145


>gb|ACL54615.1| unknown [Zea mays]
          Length = 376

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
 Frame = -2

Query: 300 TGAMTTEVDPEFAAWNQRDQMILSWINSSLTPSVLSTGARCTSSRDTWLSLEKRYASHSQ 121
           +G  T  ++PEF +W  +DQ++LS INSSL+  VL+T    T++R  W +LE+ YAS S+
Sbjct: 74  SGGRTIAINPEFTSWYHQDQLVLSVINSSLSEEVLATVVDATTARGAWSTLERMYASSSR 133

Query: 120 -RFSADRMKMVS 88
            R    RM++ +
Sbjct: 134 VRIMQIRMQLAT 145


>ref|XP_002331884.1| predicted protein [Populus trichocarpa] gi|222874633|gb|EEF11764.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/75 (37%), Positives = 51/75 (68%)
 Frame = -2

Query: 300 TGAMTTEVDPEFAAWNQRDQMILSWINSSLTPSVLSTGARCTSSRDTWLSLEKRYASHSQ 121
           TGA+T   +PE+  W ++D +IL+ IN+SLT  VLS     T+S++ WL+L++ ++S+S+
Sbjct: 75  TGAITKIPNPEYDHWLRQDSLILATINTSLTEDVLSQIMSYTTSKNVWLALQRNFSSNSR 134

Query: 120 RFSADRMKMVSTLST 76
              A  +++ + L+T
Sbjct: 135 ---AKAVQLCTQLAT 146