BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038699
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containi...   125   4e-27
ref|XP_002520500.1| pentatricopeptide repeat-containing protein,...   120   1e-25
emb|CBI16054.3| unnamed protein product [Vitis vinifera]              116   2e-24
ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containi...   116   2e-24
ref|XP_002313416.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24

>ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
           gi|449474033|ref|XP_004154055.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
           gi|449510921|ref|XP_004163811.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 649

 Score =  125 bits (314), Expect = 4e-27
 Identities = 62/80 (77%), Positives = 68/80 (85%)
 Frame = -1

Query: 241 VYARFGCVSYAGSVFKEMPVRNVVSWSAMIACYVKNERPFEALELFWEMMSGGLDVVPNS 62
           +YARFGCVSYA +VF EMPV+NVVSWSAMIACY KN +P+EALELF EMM    D VPNS
Sbjct: 218 MYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNS 277

Query: 61  VTMVSVLQACAALSALGQGK 2
           VTMVSVLQACAA +AL QGK
Sbjct: 278 VTMVSVLQACAAFAALEQGK 297


>ref|XP_002520500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540342|gb|EEF41913.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 414

 Score =  120 bits (301), Expect = 1e-25
 Identities = 62/80 (77%), Positives = 66/80 (82%)
 Frame = -1

Query: 241 VYARFGCVSYAGSVFKEMPVRNVVSWSAMIACYVKNERPFEALELFWEMMSGGLDVVPNS 62
           +YARFG VSYA  VF EM V+NVVSWSAMIACY KN RPFEALELF EMM    D+ PNS
Sbjct: 220 MYARFGYVSYASCVFSEMSVKNVVSWSAMIACYAKNGRPFEALELFREMMLETKDMCPNS 279

Query: 61  VTMVSVLQACAALSALGQGK 2
           VTMVSVLQACAAL+AL QGK
Sbjct: 280 VTMVSVLQACAALAALEQGK 299


>emb|CBI16054.3| unnamed protein product [Vitis vinifera]
          Length = 476

 Score =  116 bits (290), Expect = 2e-24
 Identities = 58/80 (72%), Positives = 66/80 (82%)
 Frame = -1

Query: 241 VYARFGCVSYAGSVFKEMPVRNVVSWSAMIACYVKNERPFEALELFWEMMSGGLDVVPNS 62
           +YARFGCV  A  VF +MPV+NVVSWSAMIACY KN +P EALELF +MM    D++PNS
Sbjct: 227 MYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNS 286

Query: 61  VTMVSVLQACAALSALGQGK 2
           VTMVSVLQACAAL+AL QGK
Sbjct: 287 VTMVSVLQACAALAALEQGK 306


>ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Vitis vinifera]
          Length = 658

 Score =  116 bits (290), Expect = 2e-24
 Identities = 58/80 (72%), Positives = 66/80 (82%)
 Frame = -1

Query: 241 VYARFGCVSYAGSVFKEMPVRNVVSWSAMIACYVKNERPFEALELFWEMMSGGLDVVPNS 62
           +YARFGCV  A  VF +MPV+NVVSWSAMIACY KN +P EALELF +MM    D++PNS
Sbjct: 227 MYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNS 286

Query: 61  VTMVSVLQACAALSALGQGK 2
           VTMVSVLQACAAL+AL QGK
Sbjct: 287 VTMVSVLQACAALAALEQGK 306


>ref|XP_002313416.1| predicted protein [Populus trichocarpa] gi|222849824|gb|EEE87371.1|
           predicted protein [Populus trichocarpa]
          Length = 650

 Score =  115 bits (288), Expect = 4e-24
 Identities = 57/80 (71%), Positives = 66/80 (82%)
 Frame = -1

Query: 241 VYARFGCVSYAGSVFKEMPVRNVVSWSAMIACYVKNERPFEALELFWEMMSGGLDVVPNS 62
           +YA+FGCVS A  VF +MPV+NVVSWSAMIACY KN + FEALELF E+M    D+ PNS
Sbjct: 219 MYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNS 278

Query: 61  VTMVSVLQACAALSALGQGK 2
           VTMVSVLQACAAL+AL QG+
Sbjct: 279 VTMVSVLQACAALAALEQGR 298