BLASTX nr result

ID: Coptis21_contig00038694 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038694
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532898.1| rRNA methylase, putative [Ricinus communis] ...    84   9e-15
ref|XP_002306029.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002278944.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methylt...    75   7e-12
emb|CBI22273.3| unnamed protein product [Vitis vinifera]               75   7e-12
ref|XP_004159655.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methylt...    73   2e-11

>ref|XP_002532898.1| rRNA methylase, putative [Ricinus communis]
           gi|223527332|gb|EEF29478.1| rRNA methylase, putative
           [Ricinus communis]
          Length = 334

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 41/55 (74%), Positives = 46/55 (83%)
 Frame = +1

Query: 1   QAVCDRTFRLGCHGDLTMRENQILRAEFSLRHSSSAIGIAHEYAKRKADWSIPKL 165
           QAVCDRT RLG HGDLT+ E+++L AEFSLRHS SAI IAHEYAKRKA   +PKL
Sbjct: 280 QAVCDRTSRLGSHGDLTLAESRVLLAEFSLRHSKSAISIAHEYAKRKAATPMPKL 334


>ref|XP_002306029.1| predicted protein [Populus trichocarpa] gi|222848993|gb|EEE86540.1|
           predicted protein [Populus trichocarpa]
          Length = 269

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 39/54 (72%), Positives = 41/54 (75%)
 Frame = +1

Query: 4   AVCDRTFRLGCHGDLTMRENQILRAEFSLRHSSSAIGIAHEYAKRKADWSIPKL 165
           AVCDRT RLG HGDLT  E QIL AEFSLRHS + I IAH+YAKRKA    PKL
Sbjct: 216 AVCDRTSRLGSHGDLTPEETQILLAEFSLRHSKNMISIAHDYAKRKAATPKPKL 269


>ref|XP_002278944.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methyltransferase-like [Vitis
           vinifera]
          Length = 372

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 37/54 (68%), Positives = 43/54 (79%)
 Frame = +1

Query: 4   AVCDRTFRLGCHGDLTMRENQILRAEFSLRHSSSAIGIAHEYAKRKADWSIPKL 165
           AVCDRT RLG HGDL++ E++IL AEFSLRHS SA  IAHE+AKRKA   + KL
Sbjct: 319 AVCDRTSRLGSHGDLSLEESRILLAEFSLRHSKSANSIAHEFAKRKAASPVSKL 372


>emb|CBI22273.3| unnamed protein product [Vitis vinifera]
          Length = 369

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 37/54 (68%), Positives = 43/54 (79%)
 Frame = +1

Query: 4   AVCDRTFRLGCHGDLTMRENQILRAEFSLRHSSSAIGIAHEYAKRKADWSIPKL 165
           AVCDRT RLG HGDL++ E++IL AEFSLRHS SA  IAHE+AKRKA   + KL
Sbjct: 316 AVCDRTSRLGSHGDLSLEESRILLAEFSLRHSKSANSIAHEFAKRKAASPVSKL 369


>ref|XP_004159655.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methyltransferase-like
           [Cucumis sativus]
          Length = 182

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 36/46 (78%), Positives = 38/46 (82%)
 Frame = +1

Query: 4   AVCDRTFRLGCHGDLTMRENQILRAEFSLRHSSSAIGIAHEYAKRK 141
           AVC+RT RLGCHGDLT  E QIL AEFSLRHS SAI IA+E AKRK
Sbjct: 126 AVCNRTSRLGCHGDLTSEERQILLAEFSLRHSKSAISIANELAKRK 171


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