BLASTX nr result
ID: Coptis21_contig00038694
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00038694 (304 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002532898.1| rRNA methylase, putative [Ricinus communis] ... 84 9e-15 ref|XP_002306029.1| predicted protein [Populus trichocarpa] gi|2... 77 1e-12 ref|XP_002278944.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methylt... 75 7e-12 emb|CBI22273.3| unnamed protein product [Vitis vinifera] 75 7e-12 ref|XP_004159655.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methylt... 73 2e-11 >ref|XP_002532898.1| rRNA methylase, putative [Ricinus communis] gi|223527332|gb|EEF29478.1| rRNA methylase, putative [Ricinus communis] Length = 334 Score = 84.3 bits (207), Expect = 9e-15 Identities = 41/55 (74%), Positives = 46/55 (83%) Frame = +1 Query: 1 QAVCDRTFRLGCHGDLTMRENQILRAEFSLRHSSSAIGIAHEYAKRKADWSIPKL 165 QAVCDRT RLG HGDLT+ E+++L AEFSLRHS SAI IAHEYAKRKA +PKL Sbjct: 280 QAVCDRTSRLGSHGDLTLAESRVLLAEFSLRHSKSAISIAHEYAKRKAATPMPKL 334 >ref|XP_002306029.1| predicted protein [Populus trichocarpa] gi|222848993|gb|EEE86540.1| predicted protein [Populus trichocarpa] Length = 269 Score = 77.0 bits (188), Expect = 1e-12 Identities = 39/54 (72%), Positives = 41/54 (75%) Frame = +1 Query: 4 AVCDRTFRLGCHGDLTMRENQILRAEFSLRHSSSAIGIAHEYAKRKADWSIPKL 165 AVCDRT RLG HGDLT E QIL AEFSLRHS + I IAH+YAKRKA PKL Sbjct: 216 AVCDRTSRLGSHGDLTPEETQILLAEFSLRHSKNMISIAHDYAKRKAATPKPKL 269 >ref|XP_002278944.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methyltransferase-like [Vitis vinifera] Length = 372 Score = 74.7 bits (182), Expect = 7e-12 Identities = 37/54 (68%), Positives = 43/54 (79%) Frame = +1 Query: 4 AVCDRTFRLGCHGDLTMRENQILRAEFSLRHSSSAIGIAHEYAKRKADWSIPKL 165 AVCDRT RLG HGDL++ E++IL AEFSLRHS SA IAHE+AKRKA + KL Sbjct: 319 AVCDRTSRLGSHGDLSLEESRILLAEFSLRHSKSANSIAHEFAKRKAASPVSKL 372 >emb|CBI22273.3| unnamed protein product [Vitis vinifera] Length = 369 Score = 74.7 bits (182), Expect = 7e-12 Identities = 37/54 (68%), Positives = 43/54 (79%) Frame = +1 Query: 4 AVCDRTFRLGCHGDLTMRENQILRAEFSLRHSSSAIGIAHEYAKRKADWSIPKL 165 AVCDRT RLG HGDL++ E++IL AEFSLRHS SA IAHE+AKRKA + KL Sbjct: 316 AVCDRTSRLGSHGDLSLEESRILLAEFSLRHSKSANSIAHEFAKRKAASPVSKL 369 >ref|XP_004159655.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methyltransferase-like [Cucumis sativus] Length = 182 Score = 73.2 bits (178), Expect = 2e-11 Identities = 36/46 (78%), Positives = 38/46 (82%) Frame = +1 Query: 4 AVCDRTFRLGCHGDLTMRENQILRAEFSLRHSSSAIGIAHEYAKRK 141 AVC+RT RLGCHGDLT E QIL AEFSLRHS SAI IA+E AKRK Sbjct: 126 AVCNRTSRLGCHGDLTSEERQILLAEFSLRHSKSAISIANELAKRK 171