BLASTX nr result

ID: Coptis21_contig00038686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038686
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604758.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   134   1e-29
ref|XP_003605542.1| Helicase-like protein [Medicago truncatula] ...   133   1e-29
ref|XP_003605523.1| Helicase-like protein [Medicago truncatula] ...   133   1e-29
ref|XP_001835316.2| transcriptional factor B3 [Coprinopsis ciner...   133   2e-29
ref|XP_003638005.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   132   3e-29

>ref|XP_003604758.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355505813|gb|AES86955.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 175

 Score =  134 bits (336), Expect = 1e-29
 Identities = 66/104 (63%), Positives = 77/104 (74%)
 Frame = -1

Query: 321 PRDGLCNGTRLIVLRCERRVLEAMIITGAKAGITVFIPRISLTPSTAEMPFQMSRRQFPV 142
           P  GLCNGTRLI+ +  R VLE  +ITG+  G  VFIPR+SL PS   +PF+  RRQFP+
Sbjct: 43  PTTGLCNGTRLIITKMGRYVLEGKVITGSNIGEKVFIPRLSLEPSDTRIPFKFQRRQFPI 102

Query: 141 RLAFAMTINKSQGQSVKYVGINLETPAFSHGQLYVALSRSTSSK 10
            + FAMTINKSQGQS+K VGI L  P FSHGQLYVA+SR TS K
Sbjct: 103 SVCFAMTINKSQGQSLKQVGIYLPQPVFSHGQLYVAISRVTSRK 146


>ref|XP_003605542.1| Helicase-like protein [Medicago truncatula]
            gi|355506597|gb|AES87739.1| Helicase-like protein
            [Medicago truncatula]
          Length = 1641

 Score =  133 bits (335), Expect = 1e-29
 Identities = 66/104 (63%), Positives = 80/104 (76%)
 Frame = -1

Query: 321  PRDGLCNGTRLIVLRCERRVLEAMIITGAKAGITVFIPRISLTPSTAEMPFQMSRRQFPV 142
            P  GLCNGTRLIV +  R VLEA +ITG+  G  V+IPR+SLTPS   +PF+  R+QFP+
Sbjct: 1424 PTAGLCNGTRLIVTKMGRYVLEAKVITGSNIGDIVYIPRLSLTPSDTRIPFKFQRKQFPI 1483

Query: 141  RLAFAMTINKSQGQSVKYVGINLETPAFSHGQLYVALSRSTSSK 10
             ++FAMTINKSQGQS++ VGI L  P FSHGQLYVA+SR TS K
Sbjct: 1484 SVSFAMTINKSQGQSLQKVGIYLPQPVFSHGQLYVAVSRVTSRK 1527


>ref|XP_003605523.1| Helicase-like protein [Medicago truncatula]
            gi|355506578|gb|AES87720.1| Helicase-like protein
            [Medicago truncatula]
          Length = 1585

 Score =  133 bits (335), Expect = 1e-29
 Identities = 66/104 (63%), Positives = 80/104 (76%)
 Frame = -1

Query: 321  PRDGLCNGTRLIVLRCERRVLEAMIITGAKAGITVFIPRISLTPSTAEMPFQMSRRQFPV 142
            P  GLCNGTRLIV +  R VLEA +ITG+  G  V+IPR+SLTPS   +PF+  R+QFP+
Sbjct: 1453 PTAGLCNGTRLIVTKMGRYVLEAKVITGSNIGDIVYIPRLSLTPSDTRIPFKFQRKQFPI 1512

Query: 141  RLAFAMTINKSQGQSVKYVGINLETPAFSHGQLYVALSRSTSSK 10
             ++FAMTINKSQGQS++ VGI L  P FSHGQLYVA+SR TS K
Sbjct: 1513 SVSFAMTINKSQGQSLQKVGIYLPQPVFSHGQLYVAVSRVTSRK 1556


>ref|XP_001835316.2| transcriptional factor B3 [Coprinopsis cinerea okayama7#130]
            gi|298403796|gb|EAU86521.2| transcriptional factor B3
            [Coprinopsis cinerea okayama7#130]
          Length = 1655

 Score =  133 bits (334), Expect = 2e-29
 Identities = 69/107 (64%), Positives = 82/107 (76%), Gaps = 1/107 (0%)
 Frame = -1

Query: 321  PRDGLCNGTRLIVLRCERRVLEAMIITGAKAGITVFIPRISLTPS-TAEMPFQMSRRQFP 145
            P+ GLCNGTR++V R   RVLE  II G   G  VFIPRISL PS   ++  +  RRQFP
Sbjct: 1525 PKHGLCNGTRMVVTRMSDRVLEVQIIGGECNGDRVFIPRISLIPSDNDDILIKFRRRQFP 1584

Query: 144  VRLAFAMTINKSQGQSVKYVGINLETPAFSHGQLYVALSRSTSSKRI 4
            VRLAFA+TINK+QGQSVKYVG++L  P F+HGQLYVALSR+TS +RI
Sbjct: 1585 VRLAFALTINKAQGQSVKYVGLDLRNPVFAHGQLYVALSRATSRQRI 1631


>ref|XP_003638005.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
            gi|355503940|gb|AES85143.1| ATP-dependent DNA helicase
            PIF1 [Medicago truncatula]
          Length = 841

 Score =  132 bits (332), Expect = 3e-29
 Identities = 62/99 (62%), Positives = 78/99 (78%)
 Frame = -1

Query: 312  GLCNGTRLIVLRCERRVLEAMIITGAKAGITVFIPRISLTPSTAEMPFQMSRRQFPVRLA 133
            GLCNGTRL++ +  R VLE  +ITG+  G  V+IPR+SL+PS   +PF+ +RRQFP+R+ 
Sbjct: 711  GLCNGTRLLITKMGRYVLEGKVITGSNVGEKVYIPRLSLSPSDTRIPFKFNRRQFPIRVC 770

Query: 132  FAMTINKSQGQSVKYVGINLETPAFSHGQLYVALSRSTS 16
            FAMTINKSQGQS+K VG+ L  P FSHGQLYVA+SR TS
Sbjct: 771  FAMTINKSQGQSLKQVGVYLSQPVFSHGQLYVAISRVTS 809


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