BLASTX nr result
ID: Coptis21_contig00038666
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00038666 (284 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI19060.3| unnamed protein product [Vitis vinifera] 74 1e-11 ref|XP_002302252.1| predicted protein [Populus trichocarpa] gi|2... 69 4e-10 ref|XP_002284405.1| PREDICTED: uncharacterized protein LOC100254... 69 5e-10 ref|XP_003598118.1| CrcB-like protein [Medicago truncatula] gi|3... 67 1e-09 ref|XP_002306618.1| predicted protein [Populus trichocarpa] gi|2... 65 7e-09 >emb|CBI19060.3| unnamed protein product [Vitis vinifera] Length = 528 Score = 73.9 bits (180), Expect = 1e-11 Identities = 46/109 (42%), Positives = 56/109 (51%), Gaps = 33/109 (30%) Frame = -2 Query: 229 VTPDISDDDVGETDLVQESKKELPWILECLSILAYLAVFGKLGL---------------- 98 ++P SD V D +++KKELPW++E +S L +LAV G LG Sbjct: 175 ISPLSSDAMVYSADKDEDNKKELPWLVEYISCLIHLAVLGILGALTRYLLQKLFGPGVAS 234 Query: 97 -----------------GSFLMTWLGFVFKGDISRVSEHLAIGLTTGYL 2 GSFLM W G VFKGDIS VS+ LAIGLTTGYL Sbjct: 235 LTSNQSILYLDLPSNMAGSFLMGWWGVVFKGDISSVSDQLAIGLTTGYL 283 >ref|XP_002302252.1| predicted protein [Populus trichocarpa] gi|222843978|gb|EEE81525.1| predicted protein [Populus trichocarpa] Length = 462 Score = 68.9 bits (167), Expect = 4e-10 Identities = 45/96 (46%), Positives = 51/96 (53%), Gaps = 36/96 (37%) Frame = -2 Query: 181 QESKKE---LPWILECLSILAYLAVFGKLGL----------------------------- 98 QE K++ LP +LE +S L YLAVFG LG+ Sbjct: 128 QEDKEKAFALPPLLEYMSCLVYLAVFGILGVLTRYKLQKLFGPGVAGVTSDNYPLYLDLP 187 Query: 97 ----GSFLMTWLGFVFKGDISRVSEHLAIGLTTGYL 2 GSFLM W G VFKGDISRVS+HLAIGLTTGYL Sbjct: 188 SNMVGSFLMGWWGVVFKGDISRVSDHLAIGLTTGYL 223 >ref|XP_002284405.1| PREDICTED: uncharacterized protein LOC100254107 [Vitis vinifera] Length = 510 Score = 68.6 bits (166), Expect = 5e-10 Identities = 41/92 (44%), Positives = 48/92 (52%), Gaps = 33/92 (35%) Frame = -2 Query: 178 ESKKELPWILECLSILAYLAVFGKLGL--------------------------------- 98 ++KKELPW++E +S L +LAV G LG Sbjct: 174 DNKKELPWLVEYISCLIHLAVLGILGALTRYLLQKLFGPGVASLTSNQSILYLDLPSNMA 233 Query: 97 GSFLMTWLGFVFKGDISRVSEHLAIGLTTGYL 2 GSFLM W G VFKGDIS VS+ LAIGLTTGYL Sbjct: 234 GSFLMGWWGVVFKGDISSVSDQLAIGLTTGYL 265 >ref|XP_003598118.1| CrcB-like protein [Medicago truncatula] gi|355487166|gb|AES68369.1| CrcB-like protein [Medicago truncatula] Length = 383 Score = 67.0 bits (162), Expect = 1e-09 Identities = 42/113 (37%), Positives = 57/113 (50%), Gaps = 33/113 (29%) Frame = -2 Query: 241 SGRKVTPDISDDDVGETDLVQESKKELPWILECLSILAYLAVFGKLGL------------ 98 + +++P +S++ D+ QE KELP +L+ S L +LAVFG LG+ Sbjct: 27 TSEQMSPLLSNEREDSEDIQQEPSKELPKLLDNASYLIHLAVFGILGVLTRYTLDKLFGP 86 Query: 97 ---------------------GSFLMTWLGFVFKGDISRVSEHLAIGLTTGYL 2 GSFLM W G VFK DIS VS++LA+ LTTGYL Sbjct: 87 SVGHVTSDQTILYLDLPSNMVGSFLMGWFGVVFKEDISNVSKYLAVALTTGYL 139 >ref|XP_002306618.1| predicted protein [Populus trichocarpa] gi|222856067|gb|EEE93614.1| predicted protein [Populus trichocarpa] Length = 470 Score = 64.7 bits (156), Expect = 7e-09 Identities = 48/116 (41%), Positives = 56/116 (48%), Gaps = 36/116 (31%) Frame = -2 Query: 241 SGRKVTPDISDDDVGETDLVQESKKE---LPWILECLSILAYLAVFGKLGL--------- 98 S ++ IS D V + QE K++ LP LE +S L YLAVFG LG+ Sbjct: 116 SAEEIVSPISTDAVVCSREKQEDKEKAFVLPPALEYISCLLYLAVFGILGVLTRYLLQKL 175 Query: 97 ------------------------GSFLMTWLGFVFKGDISRVSEHLAIGLTTGYL 2 GSFLM W G VFK DIS+VS HLAIGLTTGYL Sbjct: 176 FGPGVAGVTSDNYPLYLDLPSNMVGSFLMGWWGVVFKEDISKVSGHLAIGLTTGYL 231