BLASTX nr result

ID: Coptis21_contig00038666 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038666
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19060.3| unnamed protein product [Vitis vinifera]               74   1e-11
ref|XP_002302252.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-10
ref|XP_002284405.1| PREDICTED: uncharacterized protein LOC100254...    69   5e-10
ref|XP_003598118.1| CrcB-like protein [Medicago truncatula] gi|3...    67   1e-09
ref|XP_002306618.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09

>emb|CBI19060.3| unnamed protein product [Vitis vinifera]
          Length = 528

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 46/109 (42%), Positives = 56/109 (51%), Gaps = 33/109 (30%)
 Frame = -2

Query: 229 VTPDISDDDVGETDLVQESKKELPWILECLSILAYLAVFGKLGL---------------- 98
           ++P  SD  V   D  +++KKELPW++E +S L +LAV G LG                 
Sbjct: 175 ISPLSSDAMVYSADKDEDNKKELPWLVEYISCLIHLAVLGILGALTRYLLQKLFGPGVAS 234

Query: 97  -----------------GSFLMTWLGFVFKGDISRVSEHLAIGLTTGYL 2
                            GSFLM W G VFKGDIS VS+ LAIGLTTGYL
Sbjct: 235 LTSNQSILYLDLPSNMAGSFLMGWWGVVFKGDISSVSDQLAIGLTTGYL 283


>ref|XP_002302252.1| predicted protein [Populus trichocarpa] gi|222843978|gb|EEE81525.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 45/96 (46%), Positives = 51/96 (53%), Gaps = 36/96 (37%)
 Frame = -2

Query: 181 QESKKE---LPWILECLSILAYLAVFGKLGL----------------------------- 98
           QE K++   LP +LE +S L YLAVFG LG+                             
Sbjct: 128 QEDKEKAFALPPLLEYMSCLVYLAVFGILGVLTRYKLQKLFGPGVAGVTSDNYPLYLDLP 187

Query: 97  ----GSFLMTWLGFVFKGDISRVSEHLAIGLTTGYL 2
               GSFLM W G VFKGDISRVS+HLAIGLTTGYL
Sbjct: 188 SNMVGSFLMGWWGVVFKGDISRVSDHLAIGLTTGYL 223


>ref|XP_002284405.1| PREDICTED: uncharacterized protein LOC100254107 [Vitis vinifera]
          Length = 510

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 41/92 (44%), Positives = 48/92 (52%), Gaps = 33/92 (35%)
 Frame = -2

Query: 178 ESKKELPWILECLSILAYLAVFGKLGL--------------------------------- 98
           ++KKELPW++E +S L +LAV G LG                                  
Sbjct: 174 DNKKELPWLVEYISCLIHLAVLGILGALTRYLLQKLFGPGVASLTSNQSILYLDLPSNMA 233

Query: 97  GSFLMTWLGFVFKGDISRVSEHLAIGLTTGYL 2
           GSFLM W G VFKGDIS VS+ LAIGLTTGYL
Sbjct: 234 GSFLMGWWGVVFKGDISSVSDQLAIGLTTGYL 265


>ref|XP_003598118.1| CrcB-like protein [Medicago truncatula] gi|355487166|gb|AES68369.1|
           CrcB-like protein [Medicago truncatula]
          Length = 383

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 42/113 (37%), Positives = 57/113 (50%), Gaps = 33/113 (29%)
 Frame = -2

Query: 241 SGRKVTPDISDDDVGETDLVQESKKELPWILECLSILAYLAVFGKLGL------------ 98
           +  +++P +S++     D+ QE  KELP +L+  S L +LAVFG LG+            
Sbjct: 27  TSEQMSPLLSNEREDSEDIQQEPSKELPKLLDNASYLIHLAVFGILGVLTRYTLDKLFGP 86

Query: 97  ---------------------GSFLMTWLGFVFKGDISRVSEHLAIGLTTGYL 2
                                GSFLM W G VFK DIS VS++LA+ LTTGYL
Sbjct: 87  SVGHVTSDQTILYLDLPSNMVGSFLMGWFGVVFKEDISNVSKYLAVALTTGYL 139


>ref|XP_002306618.1| predicted protein [Populus trichocarpa] gi|222856067|gb|EEE93614.1|
           predicted protein [Populus trichocarpa]
          Length = 470

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 48/116 (41%), Positives = 56/116 (48%), Gaps = 36/116 (31%)
 Frame = -2

Query: 241 SGRKVTPDISDDDVGETDLVQESKKE---LPWILECLSILAYLAVFGKLGL--------- 98
           S  ++   IS D V  +   QE K++   LP  LE +S L YLAVFG LG+         
Sbjct: 116 SAEEIVSPISTDAVVCSREKQEDKEKAFVLPPALEYISCLLYLAVFGILGVLTRYLLQKL 175

Query: 97  ------------------------GSFLMTWLGFVFKGDISRVSEHLAIGLTTGYL 2
                                   GSFLM W G VFK DIS+VS HLAIGLTTGYL
Sbjct: 176 FGPGVAGVTSDNYPLYLDLPSNMVGSFLMGWWGVVFKEDISKVSGHLAIGLTTGYL 231


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