BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038656
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324074.1| predicted protein [Populus trichocarpa] gi|2...   199   1e-49
ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containi...   196   1e-48
ref|XP_002530010.1| pentatricopeptide repeat-containing protein,...   190   9e-47
ref|XP_003618546.1| Pentatricopeptide repeat-containing protein ...   188   4e-46
ref|XP_003554900.1| PREDICTED: pentatricopeptide repeat-containi...   178   4e-43

>ref|XP_002324074.1| predicted protein [Populus trichocarpa] gi|222867076|gb|EEF04207.1|
           predicted protein [Populus trichocarpa]
          Length = 636

 Score =  199 bits (507), Expect = 1e-49
 Identities = 94/147 (63%), Positives = 117/147 (79%)
 Frame = -1

Query: 446 MSEKSVVSWSVMLNGVIKFEGVEKGRCWFDEMPERNEVSWTLMIAGYIENGFSREAFSLV 267
           M+E++VVSWS +L GV+K+EGVE GR  FDEMPERNEV WT+MIAGY+ NGFSRE F L+
Sbjct: 183 MNERNVVSWSTLLEGVVKWEGVENGRVVFDEMPERNEVGWTIMIAGYVGNGFSREGFLLL 242

Query: 266 SDMMSGMCFELNHVTLCSFLGACSLSGNLLMGKWVHVYAMKTMEKDMHLMVGTALVDMYS 87
            +M+      LN VTL S L AC+ SG++LMG+WVHVYA+K M ++MH+MVGTALVDMY+
Sbjct: 243 DEMVLRFRLGLNFVTLSSILSACAQSGDVLMGRWVHVYALKGMGREMHIMVGTALVDMYA 302

Query: 86  KCGQIDTACKVFETMAYRNVVTWNALL 6
           KCG ID A KVF+ +  RNVV WNA+L
Sbjct: 303 KCGPIDMAFKVFKYLPKRNVVAWNAML 329


>ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
           mitochondrial-like [Vitis vinifera]
          Length = 632

 Score =  196 bits (499), Expect = 1e-48
 Identities = 90/147 (61%), Positives = 122/147 (82%)
 Frame = -1

Query: 446 MSEKSVVSWSVMLNGVIKFEGVEKGRCWFDEMPERNEVSWTLMIAGYIENGFSREAFSLV 267
           M  +SVVSW+V+L+GVI+ EGV  GR  FDEMPERNEV+WT+MIAGY+++G ++E+F+LV
Sbjct: 179 MKGQSVVSWTVILDGVIRSEGVRNGRVVFDEMPERNEVAWTIMIAGYLDSGLTQESFALV 238

Query: 266 SDMMSGMCFELNHVTLCSFLGACSLSGNLLMGKWVHVYAMKTMEKDMHLMVGTALVDMYS 87
            +M+  +  ELN+VTLCS L ACS SG+L+MG+WVH YA+KT EK++++MVGTA+VDMY+
Sbjct: 239 REMIFDLEMELNYVTLCSILTACSQSGDLMMGRWVHAYALKTKEKELNIMVGTAMVDMYA 298

Query: 86  KCGQIDTACKVFETMAYRNVVTWNALL 6
           KCG+I  A K F+ M  RNVV+WNA+L
Sbjct: 299 KCGRIHIAFKFFKKMPQRNVVSWNAML 325


>ref|XP_002530010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530489|gb|EEF32372.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 487

 Score =  190 bits (483), Expect = 9e-47
 Identities = 83/147 (56%), Positives = 118/147 (80%)
 Frame = -1

Query: 446 MSEKSVVSWSVMLNGVIKFEGVEKGRCWFDEMPERNEVSWTLMIAGYIENGFSREAFSLV 267
           M E+ +VSW+ +L GV+ +EGVE G+  FD+MPERNEV WT+MI+GY+ +GF +E F L+
Sbjct: 191 MGERDIVSWTALLEGVVNWEGVENGKVVFDQMPERNEVGWTIMISGYVGSGFCKEGFLLL 250

Query: 266 SDMMSGMCFELNHVTLCSFLGACSLSGNLLMGKWVHVYAMKTMEKDMHLMVGTALVDMYS 87
           S+M+ G+  ELN+VTLCS L AC+ SG+++MG+WVHVYA+K M +++ +MVGTAL+DMY+
Sbjct: 251 SEMVLGLRLELNYVTLCSILSACAQSGDVVMGRWVHVYALKKMGREIDMMVGTALIDMYA 310

Query: 86  KCGQIDTACKVFETMAYRNVVTWNALL 6
           KCG+I  A +VF+ +  RNVV WNA+L
Sbjct: 311 KCGRIKMAYEVFKYLPRRNVVAWNAIL 337


>ref|XP_003618546.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355493561|gb|AES74764.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 637

 Score =  188 bits (477), Expect = 4e-46
 Identities = 87/149 (58%), Positives = 114/149 (76%)
 Frame = -1

Query: 452 DGMSEKSVVSWSVMLNGVIKFEGVEKGRCWFDEMPERNEVSWTLMIAGYIENGFSREAFS 273
           +G+  +SVVSWS  L G++K+E VE GR  FDEMPERNEV+WT+MI GY+ NGF++EAF 
Sbjct: 182 EGIEVRSVVSWSCFLEGLVKWESVESGRVLFDEMPERNEVAWTVMIVGYVGNGFTKEAFL 241

Query: 272 LVSDMMSGMCFELNHVTLCSFLGACSLSGNLLMGKWVHVYAMKTMEKDMHLMVGTALVDM 93
           L+ +M+ G  F L+ VTLCS L ACS SG++ +G+WVH YA+K M  D  +MVGT+LVDM
Sbjct: 242 LLKEMVFGCGFRLSFVTLCSVLSACSQSGDVCVGRWVHCYAVKEMGLDFGVMVGTSLVDM 301

Query: 92  YSKCGQIDTACKVFETMAYRNVVTWNALL 6
           Y+KCG+I+ A  VF +M  RNVV WNA+L
Sbjct: 302 YAKCGRINAALSVFRSMLKRNVVAWNAML 330


>ref|XP_003554900.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
           mitochondrial-like [Glycine max]
          Length = 629

 Score =  178 bits (452), Expect = 4e-43
 Identities = 85/149 (57%), Positives = 113/149 (75%), Gaps = 2/149 (1%)
 Frame = -1

Query: 446 MSEKSVVSWSVMLNGVIKFEGVEKGRCWFDEMPERNEVSWTLMIAGYIENGFSREAFSLV 267
           + E SVVSW+V+L GV+K EGVE G+  FDEMPERNEV+WT++I GY+ +GF++EAF L+
Sbjct: 174 IEEPSVVSWTVVLEGVVKCEGVESGKVVFDEMPERNEVAWTVLIKGYVGSGFTKEAFLLL 233

Query: 266 SDMM--SGMCFELNHVTLCSFLGACSLSGNLLMGKWVHVYAMKTMEKDMHLMVGTALVDM 93
            +M+   G  F LN +TLCS L ACS SG++ +G+WVH YA+K +  D+ +MVGT+LVDM
Sbjct: 234 KEMVFGCGFGFGLNSITLCSVLSACSQSGDVSVGRWVHCYAVKAVGWDLGVMVGTSLVDM 293

Query: 92  YSKCGQIDTACKVFETMAYRNVVTWNALL 6
           Y+KCG+I  A  VF  M  RNVV WNA+L
Sbjct: 294 YAKCGRISAALMVFRHMPRRNVVAWNAML 322