BLASTX nr result

ID: Coptis21_contig00038526 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038526
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera]   117   1e-24
gb|ACX85638.1| putative transposase [Cucumis melo]                    108   8e-22
ref|XP_002331234.1| predicted protein [Populus trichocarpa] gi|2...    89   7e-19
ref|XP_002336966.1| predicted protein [Populus trichocarpa] gi|2...    98   1e-18
ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|3...    96   7e-18

>emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera]
          Length = 563

 Score =  117 bits (294), Expect = 1e-24
 Identities = 67/160 (41%), Positives = 86/160 (53%), Gaps = 17/160 (10%)
 Frame = +1

Query: 91  PSLQSTVENPTDTVD---PTMAGNKRK--SPSSPAWDHFHKIEGCNLKNPRAKCNYCPVS 255
           P+  +    PTDT D   P    +KRK   P S  WDHF K++ C+   PRA CNYC + 
Sbjct: 4   PTSSTPTATPTDTPDSSLPPQGTSKRKPTKPPSEVWDHFTKVKECDPNYPRATCNYCGID 63

Query: 256 YACSSKSSGTSNMLSHMXXXXXXXXXXXXADKSQ*ILSFKDKE------------LVAVS 399
           YAC  K + TSNM +H+             D  Q  LSF+ K             L+A S
Sbjct: 64  YACHDKRNETSNMKAHL-ASGCQKHPFRCKDPKQKTLSFQSKNKEGEGEGDSGYTLLATS 122

Query: 400 FSLKACRDALSRMIIIDELPFSFVEGEGFRHFVKVIQPKF 519
           F+++ CR  L+RMII+DEL F FV+GEGFR F   +QPKF
Sbjct: 123 FNVEHCRKMLARMIIVDELAFRFVQGEGFRAFCSPLQPKF 162


>gb|ACX85638.1| putative transposase [Cucumis melo]
          Length = 680

 Score =  108 bits (270), Expect = 8e-22
 Identities = 51/128 (39%), Positives = 71/128 (55%)
 Frame = +1

Query: 136 PTMAGNKRKSPSSPAWDHFHKIEGCNLKNPRAKCNYCPVSYACSSKSSGTSNMLSHMXXX 315
           P +   K   P S  W+HF K+EGC+ K PRA C +C  SYAC SK +GT+N+  H+   
Sbjct: 17  PVLGKRKPVKPPSSVWEHFIKVEGCDPKYPRAACKHCGASYACDSKRNGTTNLKRHLEKC 76

Query: 316 XXXXXXXXXADKSQ*ILSFKDKELVAVSFSLKACRDALSRMIIIDELPFSFVEGEGFRHF 495
                      + +      +  L+  SF+ + CR  L+RM+I+DELPF FVE EGF  F
Sbjct: 77  KMYVNPLEDNVEGE---GDSESNLMTASFTQENCRKMLARMVILDELPFKFVESEGFHQF 133

Query: 496 VKVIQPKF 519
            + + PKF
Sbjct: 134 CRALNPKF 141


>ref|XP_002331234.1| predicted protein [Populus trichocarpa] gi|222873420|gb|EEF10551.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score = 89.4 bits (220), Expect(2) = 7e-19
 Identities = 50/128 (39%), Positives = 69/128 (53%), Gaps = 12/128 (9%)
 Frame = +1

Query: 172 SPAWDHFHKIEGCNLKNPRAKCNYCPVSYACSSKSSGTSNMLSHMXXXXXXXXXXXXADK 351
           S +WD F K++G +   PR +CNYC   YAC +  +GTSN+ SH+             DK
Sbjct: 60  SQSWDDFTKLDG-DPTTPRVECNYCGKDYACHTIINGTSNVWSHLKVCKKFPFV---VDK 115

Query: 352 SQ*ILSFKDKE------------LVAVSFSLKACRDALSRMIIIDELPFSFVEGEGFRHF 495
            Q IL  +  +            L  + +    CR  L +M+IIDELPF+FVEG+GFR F
Sbjct: 116 KQNILVLEPNKVWGELGDRSVGTLKVIGYDYDECRKILVKMVIIDELPFNFVEGKGFRLF 175

Query: 496 VKVIQPKF 519
            K +QP+F
Sbjct: 176 SKTLQPRF 183



 Score = 30.0 bits (66), Expect(2) = 7e-19
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +3

Query: 519 YKLPYRTQVGRDCIELYMEERRKLKSFLHG 608
           + +P    V RDC++LY+EE  +LK  L G
Sbjct: 183 FDIPSCFTVMRDCLKLYVEENERLKRALKG 212


>ref|XP_002336966.1| predicted protein [Populus trichocarpa] gi|222837471|gb|EEE75850.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 58/156 (37%), Positives = 80/156 (51%), Gaps = 12/156 (7%)
 Frame = +1

Query: 151 NKRKSPSSPAWDHFHKIEGCNLKNPRAKCNYCPVSYACSSKSSGTSNMLSHMXXXXXXXX 330
           N      S  WDHF K++  + K PRA+CNYC   YAC +  +GTSNM SH+        
Sbjct: 53  NAEDRKKSQIWDHFTKLD-VDPKAPRAECNYCGKHYACHTIVNGTSNMWSHLKVCKKFPF 111

Query: 331 XXXXADKSQ*ILSFKDK------------ELVAVSFSLKACRDALSRMIIIDELPFSFVE 474
                DK Q +L  + K             L A+ ++   CR  L++M+IIDELPF+FVE
Sbjct: 112 V---VDKKQKVLVLESKIENGELGEQNVGSLKAIGYNYDECRQTLAKMVIIDELPFNFVE 168

Query: 475 GEGFRHFVKVIQPKFTNCPIGLKLVEIASNFTWRRE 582
           G GF+ F + +QP+F          +I S FT  R+
Sbjct: 169 GRGFKLFARTMQPRF----------DIPSRFTIMRD 194


>ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|355518478|gb|AET00102.1|
            Oligoribonuclease [Medicago truncatula]
          Length = 1551

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 59/152 (38%), Positives = 82/152 (53%), Gaps = 13/152 (8%)
 Frame = +1

Query: 100  QSTVENPTDTVDPTMAGNKRKSPSSP---AWDHFHKIEGCNLKNPRAKCNYCP-VSYACS 267
            ++  +N ++  DP      ++ P  P    WDHF K +G      RA C +C   SYA  
Sbjct: 931  EAATKNVSNADDPNAEDPGKRKPCRPKSWVWDHFIKEKG------RAMCKWCKNASYAAD 984

Query: 268  SKSSGTSNMLSHMXXXXXXXXXXXXA--DKSQ*ILSFKDKE-------LVAVSFSLKACR 420
            S +SGTSN+ +H+               D +Q ILS +D +       +VAV F +   R
Sbjct: 985  SHNSGTSNLSTHLRKQCKKFPKHLDPNYDPNQTILSLQDSKGTSSNSTIVAVHFDVDVSR 1044

Query: 421  DALSRMIIIDELPFSFVEGEGFRHFVKVIQPK 516
             AL+RMII+DELPFSFVE EGFR+F+ V QP+
Sbjct: 1045 QALARMIIVDELPFSFVENEGFRYFMSVTQPR 1076


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