BLASTX nr result

ID: Coptis21_contig00038503 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038503
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297619.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15
emb|CBI16552.3| unnamed protein product [Vitis vinifera]               77   1e-12
ref|XP_002283740.1| PREDICTED: LRR receptor-like serine/threonin...    77   1e-12
emb|CAN75789.1| hypothetical protein VITISV_041017 [Vitis vinifera]    77   1e-12
ref|XP_002523410.1| serine-threonine protein kinase, plant-type,...    75   5e-12

>ref|XP_002297619.1| predicted protein [Populus trichocarpa] gi|222844877|gb|EEE82424.1|
           predicted protein [Populus trichocarpa]
          Length = 805

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 44/88 (50%), Positives = 59/88 (67%)
 Frame = -3

Query: 266 IYFFVSLSFYTSLCCPKEQKEALLQFKASLINETDGNSSLETVIGGIESWNSSLDCCQWD 87
           + F +S+ F TSLCCP +QK ALL FK+SL++    NSS +  +  ++SW+ S DCC WD
Sbjct: 7   LLFSLSILFSTSLCCPDDQKLALLHFKSSLLDSI--NSSTQYSLSSLDSWDDSSDCCHWD 64

Query: 86  LVTCNPRRSPSRNVVALDLYSFVTSLAP 3
           +VTC+  RS SR VVAL L S V +  P
Sbjct: 65  MVTCS-SRSNSRKVVALHLDSLVLAEQP 91


>emb|CBI16552.3| unnamed protein product [Vitis vinifera]
          Length = 372

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/86 (48%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
 Frame = -3

Query: 257 FVSLSFYTSLCCPKEQKEALLQFKASLINETDGNSSLETVIGGIESWNSSLDCCQWDLVT 78
           F+S+     L CP+ QK+ALLQFK+S++     NSS  +   G+ESWNSS  CCQWD VT
Sbjct: 12  FLSIFILPCLSCPEYQKQALLQFKSSILAS---NSSFNSSTFGLESWNSSSSCCQWDQVT 68

Query: 77  C-NPRRSPSRNVVALDLYSFVTSLAP 3
           C +P  S SR V  L L +  T L P
Sbjct: 69  CSSPSNSTSRVVTGLYLSALYTMLPP 94


>ref|XP_002283740.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1
           [Vitis vinifera]
          Length = 814

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/86 (48%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
 Frame = -3

Query: 257 FVSLSFYTSLCCPKEQKEALLQFKASLINETDGNSSLETVIGGIESWNSSLDCCQWDLVT 78
           F+S+     L CP+ QK+ALLQFK+S++     NSS  +   G+ESWNSS  CCQWD VT
Sbjct: 12  FLSIFILPCLSCPEYQKQALLQFKSSILAS---NSSFNSSTFGLESWNSSSSCCQWDQVT 68

Query: 77  C-NPRRSPSRNVVALDLYSFVTSLAP 3
           C +P  S SR V  L L +  T L P
Sbjct: 69  CSSPSNSTSRVVTGLYLSALYTMLPP 94


>emb|CAN75789.1| hypothetical protein VITISV_041017 [Vitis vinifera]
          Length = 793

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/86 (48%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
 Frame = -3

Query: 257 FVSLSFYTSLCCPKEQKEALLQFKASLINETDGNSSLETVIGGIESWNSSLDCCQWDLVT 78
           F+S+     L CP+ QK+ALLQFK+S++     NSS  +   G+ESWNSS  CCQWD VT
Sbjct: 12  FLSIFILPCLSCPEYQKQALLQFKSSILAS---NSSFNSSTFGLESWNSSSSCCQWDQVT 68

Query: 77  C-NPRRSPSRNVVALDLYSFVTSLAP 3
           C +P  S SR V  L L +  T L P
Sbjct: 69  CSSPSNSTSRVVTGLYLSALYTMLPP 94


>ref|XP_002523410.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223537360|gb|EEF38989.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 816

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 40/98 (40%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
 Frame = -3

Query: 287 NLASFINIYFFVSLSFYTSLCCPKEQKEALLQFKASLI---NETDGNSSLETVIGGIESW 117
           NL   I +  F+   F  +L CP + K+ALLQFK+ +I   N T  +SS +  + G++SW
Sbjct: 3   NLRFLIFLLLFLFFFFTPTLSCPDDHKQALLQFKSLVIRTLNSTSSSSSSDYSLFGLDSW 62

Query: 116 NSSLDCCQWDLVTCNPRRSPSRNVVALDLYSFVTSLAP 3
            S+ DCCQW++V C    S SR+V +L + S V S+ P
Sbjct: 63  TSASDCCQWEMVGCK-ANSTSRSVTSLSVSSLVGSVNP 99


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