BLASTX nr result

ID: Coptis21_contig00038500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038500
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32369.3| unnamed protein product [Vitis vinifera]              185   4e-45
ref|XP_002277508.1| PREDICTED: transcription factor TT8 [Vitis v...   185   4e-45
gb|ACC68685.1| bHLH-like DNA binding protein [Vitis vinifera]         185   4e-45
emb|CAN62848.1| hypothetical protein VITISV_010152 [Vitis vinifera]   185   4e-45
gb|ADY15317.1| transparent testa 8 [Prunus avium]                     174   9e-42

>emb|CBI32369.3| unnamed protein product [Vitis vinifera]
          Length = 620

 Score =  185 bits (469), Expect = 4e-45
 Identities = 98/141 (69%), Positives = 113/141 (80%), Gaps = 3/141 (2%)
 Frame = -3

Query: 416 YSQTVSTILQRNSSRFSELSSPGCLGYSSSQSSFSKWNHKNMHLTHSPS-DGTSQFFLKY 240
           YSQTVSTILQ   +R+SE SS GC+   SSQS+F+KW  +  H  H  + +GTSQ+ LKY
Sbjct: 313 YSQTVSTILQHQPNRWSESSSSGCIAPYSSQSAFAKWTTRCDHHHHPMAVEGTSQWLLKY 372

Query: 239 ILFNVPTLHNKHHEENSPRPRDGDTV--IRRSTSQDELSANHVLAERRRREKLNERFIIL 66
           ILF+VP LH K+ +ENSP+ RDGD+    R+ T QDELSANHVLAERRRREKLNERFIIL
Sbjct: 373 ILFSVPFLHTKYRDENSPKSRDGDSAGRFRKGTPQDELSANHVLAERRRREKLNERFIIL 432

Query: 65  RSLVPFVTKMDKASILGDTIE 3
           RSLVPFVTKMDKASILGDTIE
Sbjct: 433 RSLVPFVTKMDKASILGDTIE 453


>ref|XP_002277508.1| PREDICTED: transcription factor TT8 [Vitis vinifera]
          Length = 696

 Score =  185 bits (469), Expect = 4e-45
 Identities = 98/141 (69%), Positives = 113/141 (80%), Gaps = 3/141 (2%)
 Frame = -3

Query: 416 YSQTVSTILQRNSSRFSELSSPGCLGYSSSQSSFSKWNHKNMHLTHSPS-DGTSQFFLKY 240
           YSQTVSTILQ   +R+SE SS GC+   SSQS+F+KW  +  H  H  + +GTSQ+ LKY
Sbjct: 389 YSQTVSTILQHQPNRWSESSSSGCIAPYSSQSAFAKWTTRCDHHHHPMAVEGTSQWLLKY 448

Query: 239 ILFNVPTLHNKHHEENSPRPRDGDTV--IRRSTSQDELSANHVLAERRRREKLNERFIIL 66
           ILF+VP LH K+ +ENSP+ RDGD+    R+ T QDELSANHVLAERRRREKLNERFIIL
Sbjct: 449 ILFSVPFLHTKYRDENSPKSRDGDSAGRFRKGTPQDELSANHVLAERRRREKLNERFIIL 508

Query: 65  RSLVPFVTKMDKASILGDTIE 3
           RSLVPFVTKMDKASILGDTIE
Sbjct: 509 RSLVPFVTKMDKASILGDTIE 529


>gb|ACC68685.1| bHLH-like DNA binding protein [Vitis vinifera]
          Length = 701

 Score =  185 bits (469), Expect = 4e-45
 Identities = 98/141 (69%), Positives = 113/141 (80%), Gaps = 3/141 (2%)
 Frame = -3

Query: 416 YSQTVSTILQRNSSRFSELSSPGCLGYSSSQSSFSKWNHKNMHLTHSPS-DGTSQFFLKY 240
           YSQTVSTILQ   +R+SE SS GC+   SSQS+F+KW  +  H  H  + +GTSQ+ LKY
Sbjct: 394 YSQTVSTILQHQPNRWSESSSSGCIAPYSSQSAFAKWTTRCDHHHHPMAVEGTSQWLLKY 453

Query: 239 ILFNVPTLHNKHHEENSPRPRDGDTV--IRRSTSQDELSANHVLAERRRREKLNERFIIL 66
           ILF+VP LH K+ +ENSP+ RDGD+    R+ T QDELSANHVLAERRRREKLNERFIIL
Sbjct: 454 ILFSVPFLHTKYRDENSPKSRDGDSAGRFRKGTPQDELSANHVLAERRRREKLNERFIIL 513

Query: 65  RSLVPFVTKMDKASILGDTIE 3
           RSLVPFVTKMDKASILGDTIE
Sbjct: 514 RSLVPFVTKMDKASILGDTIE 534


>emb|CAN62848.1| hypothetical protein VITISV_010152 [Vitis vinifera]
          Length = 668

 Score =  185 bits (469), Expect = 4e-45
 Identities = 98/141 (69%), Positives = 113/141 (80%), Gaps = 3/141 (2%)
 Frame = -3

Query: 416 YSQTVSTILQRNSSRFSELSSPGCLGYSSSQSSFSKWNHKNMHLTHSPS-DGTSQFFLKY 240
           YSQTVSTILQ   +R+SE SS GC+   SSQS+F+KW  +  H  H  + +GTSQ+ LKY
Sbjct: 361 YSQTVSTILQHQPNRWSESSSSGCIAPYSSQSAFAKWTTRCDHHHHPMAVEGTSQWLLKY 420

Query: 239 ILFNVPTLHNKHHEENSPRPRDGDTV--IRRSTSQDELSANHVLAERRRREKLNERFIIL 66
           ILF+VP LH K+ +ENSP+ RDGD+    R+ T QDELSANHVLAERRRREKLNERFIIL
Sbjct: 421 ILFSVPFLHTKYRDENSPKSRDGDSAGRFRKGTPQDELSANHVLAERRRREKLNERFIIL 480

Query: 65  RSLVPFVTKMDKASILGDTIE 3
           RSLVPFVTKMDKASILGDTIE
Sbjct: 481 RSLVPFVTKMDKASILGDTIE 501


>gb|ADY15317.1| transparent testa 8 [Prunus avium]
          Length = 565

 Score =  174 bits (440), Expect = 9e-42
 Identities = 92/140 (65%), Positives = 112/140 (80%), Gaps = 2/140 (1%)
 Frame = -3

Query: 416 YSQTVSTILQRNSSRFSELSSPGCLGYSSSQSSFSKWNHKNMHLTHSPSDGTSQFFLKYI 237
           YS+TVSTILQR ++R+++ S    + YS+ QS+F+KW  +  H    P +GTSQ+ LKYI
Sbjct: 322 YSETVSTILQRQATRWTDSSFTDHVAYST-QSAFAKWTTRVEHHMLVPVEGTSQWLLKYI 380

Query: 236 LFNVPTLHNKHHEENSPRPRDGD--TVIRRSTSQDELSANHVLAERRRREKLNERFIILR 63
           LF+VP LH K+ +ENSP+  +GD  T +R+ T QDELSANHVLAERRRREKLNERFIILR
Sbjct: 381 LFSVPFLHTKYRDENSPKSHEGDASTRLRKGTPQDELSANHVLAERRRREKLNERFIILR 440

Query: 62  SLVPFVTKMDKASILGDTIE 3
           SLVPFVTKMDKASILGDTIE
Sbjct: 441 SLVPFVTKMDKASILGDTIE 460


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