BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038496
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526119.1| ubiquitin-protein ligase, putative [Ricinus ...    62   4e-08
ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin...    62   5e-08
gb|AFK36190.1| unknown [Medicago truncatula]                           62   6e-08
ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncat...    62   6e-08
ref|XP_002298418.1| f-box family protein [Populus trichocarpa] g...    60   2e-07

>ref|XP_002526119.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223534616|gb|EEF36313.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 414

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 37/91 (40%), Positives = 58/91 (63%), Gaps = 5/91 (5%)
 Frame = -2

Query: 260 NETWSDIWVMKDYGVKASWNKLFTIS-HVCQYFRILR---FSEN-GKVLLGPINQDLVLY 96
           N T  DIWVMK+YG K SW +LF+ + +V  + + LR   FS+N  +VLLG  +++L+ Y
Sbjct: 276 NNTRLDIWVMKEYGAKDSWTRLFSFTPNVVPFVKCLRTLVFSKNRDEVLLGLQDKNLLWY 335

Query: 95  DPELEKAKYLEVHGISTMCCAEVYVGSLVSL 3
               ++ K +E+H + T+   +V+ GSLV L
Sbjct: 336 KIREKRVKRVEIHIVVTLFTMQVFHGSLVPL 366


>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
           gi|255637050|gb|ACU18857.1| unknown [Glycine max]
          Length = 406

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 40/92 (43%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
 Frame = -2

Query: 266 DDNETWSDIWVMKDYGVKASWNKLFTISHV-----CQYFRILRFSENGKVLLGPINQDLV 102
           D  +T   +W+MKDYGV+ SW KL +I +V       Y      SENGKVLL     DL+
Sbjct: 312 DYKKTHFVVWMMKDYGVRESWVKLVSIPYVPNPEDFSYSGPYYISENGKVLL-MFEFDLI 370

Query: 101 LYDPELEKAKYLEVHGISTMCCAEVYVGSLVS 6
           LYDP     KY ++        AEVYV +LVS
Sbjct: 371 LYDPRNNSFKYPKIESGKGWFDAEVYVETLVS 402


>gb|AFK36190.1| unknown [Medicago truncatula]
          Length = 98

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
 Frame = -2

Query: 242 IWVMKDYGVKASWNKLFTISHV-----CQYFRILRFSENGKVLLGPINQDLVLYDPELEK 78
           +W+MKDYGV+ SW KL TI ++       Y      SENG+VLL     DL+LYDP    
Sbjct: 12  VWLMKDYGVRESWIKLLTIPYLPNPEDFSYSGPYCISENGEVLL-MFEFDLILYDPRDHS 70

Query: 77  AKYLEVHGISTMCCAEVYVGSLVS 6
            +Y  + G      AEVYV SLVS
Sbjct: 71  FRYPRIEGGKGWFDAEVYVESLVS 94


>ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355483131|gb|AES64334.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 366

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
 Frame = -2

Query: 242 IWVMKDYGVKASWNKLFTISHV-----CQYFRILRFSENGKVLLGPINQDLVLYDPELEK 78
           +W+MKDYGV+ SW KL TI ++       Y      SENG+VLL     DL+LYDP    
Sbjct: 280 VWLMKDYGVRESWIKLLTIPYLPNPEDFSYSGPYCISENGEVLL-MFEFDLILYDPRDHS 338

Query: 77  AKYLEVHGISTMCCAEVYVGSLVS 6
            +Y  + G      AEVYV SLVS
Sbjct: 339 FRYPRIEGGKGWFDAEVYVESLVS 362


>ref|XP_002298418.1| f-box family protein [Populus trichocarpa]
           gi|222845676|gb|EEE83223.1| f-box family protein
           [Populus trichocarpa]
          Length = 363

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/56 (50%), Positives = 36/56 (64%)
 Frame = -2

Query: 257 ETWSDIWVMKDYGVKASWNKLFTISHVCQYFRILRFSENGKVLLGPINQDLVLYDP 90
           ET   +WVMK+YGV  SW KLF I HV    R++ F EN +VLL   + +L+ YDP
Sbjct: 261 ETSCSVWVMKEYGVGESWTKLFNIEHVEGIQRLVAFRENNEVLLAGEDGELISYDP 316