BLASTX nr result
ID: Coptis21_contig00038496
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00038496 (318 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002526119.1| ubiquitin-protein ligase, putative [Ricinus ... 62 4e-08 ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin... 62 5e-08 gb|AFK36190.1| unknown [Medicago truncatula] 62 6e-08 ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncat... 62 6e-08 ref|XP_002298418.1| f-box family protein [Populus trichocarpa] g... 60 2e-07 >ref|XP_002526119.1| ubiquitin-protein ligase, putative [Ricinus communis] gi|223534616|gb|EEF36313.1| ubiquitin-protein ligase, putative [Ricinus communis] Length = 414 Score = 62.4 bits (150), Expect = 4e-08 Identities = 37/91 (40%), Positives = 58/91 (63%), Gaps = 5/91 (5%) Frame = -2 Query: 260 NETWSDIWVMKDYGVKASWNKLFTIS-HVCQYFRILR---FSEN-GKVLLGPINQDLVLY 96 N T DIWVMK+YG K SW +LF+ + +V + + LR FS+N +VLLG +++L+ Y Sbjct: 276 NNTRLDIWVMKEYGAKDSWTRLFSFTPNVVPFVKCLRTLVFSKNRDEVLLGLQDKNLLWY 335 Query: 95 DPELEKAKYLEVHGISTMCCAEVYVGSLVSL 3 ++ K +E+H + T+ +V+ GSLV L Sbjct: 336 KIREKRVKRVEIHIVVTLFTMQVFHGSLVPL 366 >ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max] gi|255637050|gb|ACU18857.1| unknown [Glycine max] Length = 406 Score = 62.0 bits (149), Expect = 5e-08 Identities = 40/92 (43%), Positives = 50/92 (54%), Gaps = 5/92 (5%) Frame = -2 Query: 266 DDNETWSDIWVMKDYGVKASWNKLFTISHV-----CQYFRILRFSENGKVLLGPINQDLV 102 D +T +W+MKDYGV+ SW KL +I +V Y SENGKVLL DL+ Sbjct: 312 DYKKTHFVVWMMKDYGVRESWVKLVSIPYVPNPEDFSYSGPYYISENGKVLL-MFEFDLI 370 Query: 101 LYDPELEKAKYLEVHGISTMCCAEVYVGSLVS 6 LYDP KY ++ AEVYV +LVS Sbjct: 371 LYDPRNNSFKYPKIESGKGWFDAEVYVETLVS 402 >gb|AFK36190.1| unknown [Medicago truncatula] Length = 98 Score = 61.6 bits (148), Expect = 6e-08 Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 5/84 (5%) Frame = -2 Query: 242 IWVMKDYGVKASWNKLFTISHV-----CQYFRILRFSENGKVLLGPINQDLVLYDPELEK 78 +W+MKDYGV+ SW KL TI ++ Y SENG+VLL DL+LYDP Sbjct: 12 VWLMKDYGVRESWIKLLTIPYLPNPEDFSYSGPYCISENGEVLL-MFEFDLILYDPRDHS 70 Query: 77 AKYLEVHGISTMCCAEVYVGSLVS 6 +Y + G AEVYV SLVS Sbjct: 71 FRYPRIEGGKGWFDAEVYVESLVS 94 >ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncatula] gi|355483131|gb|AES64334.1| F-box/kelch-repeat protein [Medicago truncatula] Length = 366 Score = 61.6 bits (148), Expect = 6e-08 Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 5/84 (5%) Frame = -2 Query: 242 IWVMKDYGVKASWNKLFTISHV-----CQYFRILRFSENGKVLLGPINQDLVLYDPELEK 78 +W+MKDYGV+ SW KL TI ++ Y SENG+VLL DL+LYDP Sbjct: 280 VWLMKDYGVRESWIKLLTIPYLPNPEDFSYSGPYCISENGEVLL-MFEFDLILYDPRDHS 338 Query: 77 AKYLEVHGISTMCCAEVYVGSLVS 6 +Y + G AEVYV SLVS Sbjct: 339 FRYPRIEGGKGWFDAEVYVESLVS 362 >ref|XP_002298418.1| f-box family protein [Populus trichocarpa] gi|222845676|gb|EEE83223.1| f-box family protein [Populus trichocarpa] Length = 363 Score = 59.7 bits (143), Expect = 2e-07 Identities = 28/56 (50%), Positives = 36/56 (64%) Frame = -2 Query: 257 ETWSDIWVMKDYGVKASWNKLFTISHVCQYFRILRFSENGKVLLGPINQDLVLYDP 90 ET +WVMK+YGV SW KLF I HV R++ F EN +VLL + +L+ YDP Sbjct: 261 ETSCSVWVMKEYGVGESWTKLFNIEHVEGIQRLVAFRENNEVLLAGEDGELISYDP 316