BLASTX nr result

ID: Coptis21_contig00038492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038492
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containi...    59   5e-07

>ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
           [Vitis vinifera] gi|296090299|emb|CBI40118.3| unnamed
           protein product [Vitis vinifera]
          Length = 618

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 25/46 (54%), Positives = 35/46 (76%)
 Frame = +2

Query: 2   WVEVENQVHEFHAGDGFHQISRKLDGIINLLKEDMKMKVFIPLTNF 139
           W+E+ENQVHEFHAGD  H IS+ +  +INLL E+MK++ + P  +F
Sbjct: 572 WIEIENQVHEFHAGDVLHFISQDMCQVINLLNEEMKVEGYGPKVDF 617


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