BLASTX nr result

ID: Coptis21_contig00038490 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038490
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331205.1| multidrug/pheromone exporter, MDR family, AB...    79   3e-13
ref|XP_002529182.1| multidrug resistance protein 1, 2, putative ...    79   5e-13
ref|XP_003632759.1| PREDICTED: ABC transporter B family member 1...    73   2e-11
ref|XP_004141818.1| PREDICTED: ABC transporter B family member 1...    67   1e-09
ref|XP_004155963.1| PREDICTED: ABC transporter B family member 1...    66   3e-09

>ref|XP_002331205.1| multidrug/pheromone exporter, MDR family, ABC transporter family
            [Populus trichocarpa] gi|222873326|gb|EEF10457.1|
            multidrug/pheromone exporter, MDR family, ABC transporter
            family [Populus trichocarpa]
          Length = 1547

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 42/75 (56%), Positives = 48/75 (64%)
 Frame = +2

Query: 149  KRANDISKSRYAKSMQXXXXXXXXXXXXQKSNKIQLSKLWKLQKPEASMLFLGFLLGMHA 328
            K A + SKSRY KSMQ             K  K QLS++W LQ+PE   L LGFLLGMHA
Sbjct: 929  KNAFETSKSRYLKSMQAENQQEEEMQESAKPRKYQLSEIWGLQRPEIVKLLLGFLLGMHA 988

Query: 329  DAILSIFPLLLGQAL 373
             AILS+FP LLG+AL
Sbjct: 989  GAILSVFPYLLGEAL 1003


>ref|XP_002529182.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
            gi|223531360|gb|EEF33196.1| multidrug resistance protein
            1, 2, putative [Ricinus communis]
          Length = 1580

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 40/76 (52%), Positives = 48/76 (63%)
 Frame = +2

Query: 149  KRANDISKSRYAKSMQXXXXXXXXXXXXQKSNKIQLSKLWKLQKPEASMLFLGFLLGMHA 328
            K   + S+SR+ K MQ            QK  K  LS++WKLQ+PE  ML LGFLLGMHA
Sbjct: 961  KNVEETSRSRHLKFMQMENQEEEEMQEKQKPRKYHLSEIWKLQRPEVVMLLLGFLLGMHA 1020

Query: 329  DAILSIFPLLLGQALR 376
             AILS+FP LLG AL+
Sbjct: 1021 GAILSVFPFLLGLALQ 1036


>ref|XP_003632759.1| PREDICTED: ABC transporter B family member 19-like [Vitis vinifera]
          Length = 1542

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 38/76 (50%), Positives = 49/76 (64%)
 Frame = +2

Query: 149  KRANDISKSRYAKSMQXXXXXXXXXXXXQKSNKIQLSKLWKLQKPEASMLFLGFLLGMHA 328
            K  N+ S+S+Y  SMQ             K  K+ +S+++KLQ+PE  ML LGFLLGMHA
Sbjct: 924  KYMNEASRSKYLTSMQEQYKEEEEEKPEPKPGKVLVSEIFKLQRPELLMLLLGFLLGMHA 983

Query: 329  DAILSIFPLLLGQALR 376
             AILSIFP +LG AL+
Sbjct: 984  GAILSIFPFILGLALQ 999


>ref|XP_004141818.1| PREDICTED: ABC transporter B family member 19-like [Cucumis sativus]
          Length = 1450

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 40/107 (37%), Positives = 58/107 (54%), Gaps = 20/107 (18%)
 Frame = +2

Query: 116  NSWIKLASETIKRA---------------NDISKSRYAKSMQXXXXXXXXXXXX-----Q 235
            N+ +KLASE +++                NDISKS Y   +                  +
Sbjct: 800  NNLVKLASEAVRQTSPKQNDVQKFTDLSFNDISKSEYVVEISKSRYFKSTVEEKLEKKEE 859

Query: 236  KSNKIQLSKLWKLQKPEASMLFLGFLLGMHADAILSIFPLLLGQALR 376
            K  K+++++L KLQKPE  ML LGFL+G+ A AILS+FP +LG+AL+
Sbjct: 860  KGRKVRITELLKLQKPEILMLLLGFLMGLSAGAILSVFPFILGEALQ 906


>ref|XP_004155963.1| PREDICTED: ABC transporter B family member 19-like [Cucumis sativus]
          Length = 1450

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 20/107 (18%)
 Frame = +2

Query: 116  NSWIKLASETIKRA---------------NDISKSRYAKSMQXXXXXXXXXXXX-----Q 235
            N+ +KLASE +++                NDISKS Y   +                  +
Sbjct: 800  NNLVKLASEAVRQTSPKQNDVQKFTDLSFNDISKSEYVVEISKSRYFKSTVEEKLEKKEE 859

Query: 236  KSNKIQLSKLWKLQKPEASMLFLGFLLGMHADAILSIFPLLLGQALR 376
            K  K+++++L KLQKPE  ML LGF++G+ A AILS+FP +LG+AL+
Sbjct: 860  KGRKVRITELLKLQKPEILMLLLGFVMGLSAGAILSVFPFILGEALQ 906


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