BLASTX nr result

ID: Coptis21_contig00038480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038480
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21105.3| unnamed protein product [Vitis vinifera]               84   1e-14
ref|XP_002519906.1| conserved hypothetical protein [Ricinus comm...    61   1e-07

>emb|CBI21105.3| unnamed protein product [Vitis vinifera]
          Length = 1012

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 55/166 (33%), Positives = 81/166 (48%), Gaps = 3/166 (1%)
 Frame = +2

Query: 2   YGIRVPDDNSGWEWPEKIPATVGLVNYEATLPNISKNSDMFKVV---DPFILSERPGHHW 172
           +GIRVP+D SGW+WPE I AT G +    T+P++ K SD+  +V      +  E+P   W
Sbjct: 326 FGIRVPEDQSGWDWPEGISATAGFLKSSVTVPSLYKKSDLSHLVGSSGDLLRFEQP---W 382

Query: 173 NTIVSADSSHTGESVNRKTFRDVVHDAQQRNFQDGCNIPLKMLAGPAQVFLPAPADNQTM 352
           + +V   +  TG++    +  DV+H+ Q  N  D  N  LK   G +Q  L A   NQ M
Sbjct: 383 DNVVFPKNPRTGQN----SVNDVLHNKQWGNGSDRSNFLLKGSVGTSQSNLHALESNQIM 438

Query: 353 YMVKEGQIXXXXXXXXXXXEKGREDSGYQSISEYIGVLSKSGDPLI 490
              +                +G  D+  QSIS Y+  +S+SG   I
Sbjct: 439 ESTRS-----RCSTMSKVVGRGGTDNDAQSISAYVDSISRSGTSFI 479


>ref|XP_002519906.1| conserved hypothetical protein [Ricinus communis]
           gi|223540952|gb|EEF42510.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 903

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/102 (33%), Positives = 50/102 (49%)
 Frame = +2

Query: 2   YGIRVPDDNSGWEWPEKIPATVGLVNYEATLPNISKNSDMFKVVDPFILSERPGHHWNTI 181
           +GIRVP+D SGW+WPE +P    L+    ++ ++ K +    +V P     R G      
Sbjct: 308 FGIRVPEDQSGWDWPEGLPLAASLMRSGVSMSSMPKKTACINLVAPSEALARSGR----- 362

Query: 182 VSADSSHTGESVNRKTFRDVVHDAQQRNFQDGCNIPLKMLAG 307
             +D+       ++    D +HD QQRN QDG    LK L G
Sbjct: 363 PLSDAVVKNFLADQNPVIDALHDEQQRNGQDGNKFYLKGLVG 404


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