BLASTX nr result

ID: Coptis21_contig00038475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038475
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303149.1| predicted protein [Populus trichocarpa] gi|2...   296   1e-78
ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communi...   294   6e-78
ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like...   292   2e-77
emb|CBI29756.3| unnamed protein product [Vitis vinifera]              287   7e-76
ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like...   287   7e-76

>ref|XP_002303149.1| predicted protein [Populus trichocarpa] gi|222840581|gb|EEE78128.1|
           predicted protein [Populus trichocarpa]
          Length = 1194

 Score =  296 bits (758), Expect = 1e-78
 Identities = 146/168 (86%), Positives = 155/168 (92%)
 Frame = +2

Query: 2   YIPKFGEVNYIEGSQDKRWSSCDFPWTRKLEANNKKVFGNRSFRPNQREVINATMSGYDA 181
           YIP F EVNYIEGS D +WSS +FPWT+KLEANNKKVFGN SFRPNQREVINATMSGYD 
Sbjct: 417 YIPSFVEVNYIEGSNDPKWSSTNFPWTKKLEANNKKVFGNHSFRPNQREVINATMSGYDV 476

Query: 182 FVLMPTGGGKSLTYQLPALICGGITLVISPLVSLIQDQIMHLLQANIPAAYLSANMEWSE 361
           FVLMPTGGGKSLTYQLPAL+C GITLVISPLVSLIQDQIMHLLQANIPAAYLSANMEW+E
Sbjct: 477 FVLMPTGGGKSLTYQLPALVCPGITLVISPLVSLIQDQIMHLLQANIPAAYLSANMEWTE 536

Query: 362 QQEIFRELSSENCKYKLLYVTPEKVAKSDVLLRHLESLNARDLLSRIV 505
           QQEI REL S+ CKY+LLYVTPEKVAKSDVLLR+LESLN R LL+RIV
Sbjct: 537 QQEILRELCSDYCKYRLLYVTPEKVAKSDVLLRNLESLNGRGLLARIV 584


>ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communis]
           gi|223529772|gb|EEF31710.1| DNA helicase hus2, putative
           [Ricinus communis]
          Length = 1233

 Score =  294 bits (752), Expect = 6e-78
 Identities = 147/168 (87%), Positives = 155/168 (92%)
 Frame = +2

Query: 2   YIPKFGEVNYIEGSQDKRWSSCDFPWTRKLEANNKKVFGNRSFRPNQREVINATMSGYDA 181
           YIPKF EVNYIEGS D +WSS +FPWT KLEA NKKVFGN SFRPNQREVINATMSG+D 
Sbjct: 418 YIPKFVEVNYIEGSNDPKWSSTNFPWTTKLEAYNKKVFGNHSFRPNQREVINATMSGFDV 477

Query: 182 FVLMPTGGGKSLTYQLPALICGGITLVISPLVSLIQDQIMHLLQANIPAAYLSANMEWSE 361
           FVLMPTGGGKSLTYQLPAL+C GITLVISPLVSLIQDQIMHLLQANI AAYLSANMEW+E
Sbjct: 478 FVLMPTGGGKSLTYQLPALVCPGITLVISPLVSLIQDQIMHLLQANISAAYLSANMEWAE 537

Query: 362 QQEIFRELSSENCKYKLLYVTPEKVAKSDVLLRHLESLNARDLLSRIV 505
           QQEI RELSS+ CKYKLLYVTPEKVAKSDVLLR+LESLNAR LL+RIV
Sbjct: 538 QQEILRELSSDYCKYKLLYVTPEKVAKSDVLLRNLESLNARGLLARIV 585


>ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like, partial
           [Cucumis sativus] gi|449511185|ref|XP_004163888.1|
           PREDICTED: ATP-dependent DNA helicase Q-like 4A-like,
           partial [Cucumis sativus]
          Length = 1269

 Score =  292 bits (748), Expect = 2e-77
 Identities = 146/168 (86%), Positives = 156/168 (92%)
 Frame = +2

Query: 2   YIPKFGEVNYIEGSQDKRWSSCDFPWTRKLEANNKKVFGNRSFRPNQREVINATMSGYDA 181
           YIPK  +VNYIEGS DK+WSS +F WT++LEANNKKVFGN SFRPNQREVINATMSGYD 
Sbjct: 476 YIPKVIDVNYIEGSNDKKWSSRNFSWTKELEANNKKVFGNHSFRPNQREVINATMSGYDV 535

Query: 182 FVLMPTGGGKSLTYQLPALICGGITLVISPLVSLIQDQIMHLLQANIPAAYLSANMEWSE 361
           FVLMPTGGGKSLTYQLPALIC G+TLVISPLVSLIQDQIMHL+QANI AAYLSANMEWSE
Sbjct: 536 FVLMPTGGGKSLTYQLPALICPGVTLVISPLVSLIQDQIMHLIQANISAAYLSANMEWSE 595

Query: 362 QQEIFRELSSENCKYKLLYVTPEKVAKSDVLLRHLESLNARDLLSRIV 505
           QQEIFR+LSS+  KYKLLYVTPEKVAKSDVLLRHLESLNAR LL+RIV
Sbjct: 596 QQEIFRDLSSDCSKYKLLYVTPEKVAKSDVLLRHLESLNARHLLARIV 643


>emb|CBI29756.3| unnamed protein product [Vitis vinifera]
          Length = 1235

 Score =  287 bits (734), Expect = 7e-76
 Identities = 145/168 (86%), Positives = 156/168 (92%)
 Frame = +2

Query: 2   YIPKFGEVNYIEGSQDKRWSSCDFPWTRKLEANNKKVFGNRSFRPNQREVINATMSGYDA 181
           YIPK  EVNYIEGS DK+WSS +FPWT+KLEANNKKVFGN SFRPNQREVINATMSGYD 
Sbjct: 397 YIPKLIEVNYIEGSSDKKWSSGNFPWTKKLEANNKKVFGNHSFRPNQREVINATMSGYDV 456

Query: 182 FVLMPTGGGKSLTYQLPALICGGITLVISPLVSLIQDQIMHLLQANIPAAYLSANMEWSE 361
           FVLMPTGGGKSLTYQLPALI  GITLVISPLVSLIQDQIMHLLQANIPAAYLSA+MEW+E
Sbjct: 457 FVLMPTGGGKSLTYQLPALISPGITLVISPLVSLIQDQIMHLLQANIPAAYLSASMEWNE 516

Query: 362 QQEIFRELSSENCKYKLLYVTPEKVAKSDVLLRHLESLNARDLLSRIV 505
           QQEI RELSS  CKYKLLY TPEKVAKSDVL+R+L++L+AR+LLSRIV
Sbjct: 517 QQEILRELSS--CKYKLLYATPEKVAKSDVLMRNLDNLHARELLSRIV 562


>ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Vitis
           vinifera]
          Length = 1224

 Score =  287 bits (734), Expect = 7e-76
 Identities = 145/168 (86%), Positives = 156/168 (92%)
 Frame = +2

Query: 2   YIPKFGEVNYIEGSQDKRWSSCDFPWTRKLEANNKKVFGNRSFRPNQREVINATMSGYDA 181
           YIPK  EVNYIEGS DK+WSS +FPWT+KLEANNKKVFGN SFRPNQREVINATMSGYD 
Sbjct: 386 YIPKLIEVNYIEGSSDKKWSSGNFPWTKKLEANNKKVFGNHSFRPNQREVINATMSGYDV 445

Query: 182 FVLMPTGGGKSLTYQLPALICGGITLVISPLVSLIQDQIMHLLQANIPAAYLSANMEWSE 361
           FVLMPTGGGKSLTYQLPALI  GITLVISPLVSLIQDQIMHLLQANIPAAYLSA+MEW+E
Sbjct: 446 FVLMPTGGGKSLTYQLPALISPGITLVISPLVSLIQDQIMHLLQANIPAAYLSASMEWNE 505

Query: 362 QQEIFRELSSENCKYKLLYVTPEKVAKSDVLLRHLESLNARDLLSRIV 505
           QQEI RELSS  CKYKLLY TPEKVAKSDVL+R+L++L+AR+LLSRIV
Sbjct: 506 QQEILRELSS--CKYKLLYATPEKVAKSDVLMRNLDNLHARELLSRIV 551


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