BLASTX nr result

ID: Coptis21_contig00038474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038474
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520375.1| hypothetical protein RCOM_1192800 [Ricinus c...    86   4e-15
ref|XP_003633225.1| PREDICTED: uncharacterized protein LOC100854...    67   2e-09
emb|CAN63610.1| hypothetical protein VITISV_000282 [Vitis vinifera]    67   2e-09
ref|XP_003617459.1| hypothetical protein MTR_5g091810 [Medicago ...    66   3e-09
ref|XP_002876478.1| hypothetical protein ARALYDRAFT_486331 [Arab...    65   6e-09

>ref|XP_002520375.1| hypothetical protein RCOM_1192800 [Ricinus communis]
           gi|223540422|gb|EEF41991.1| hypothetical protein
           RCOM_1192800 [Ricinus communis]
          Length = 259

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 49/118 (41%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
 Frame = +3

Query: 18  AIAFEGFSIREYTSNMRTKDVDKCWPFEGNPKELKKQLVEDLLPPITSKKFKWWVNELES 197
           A A +GFSIREYT  MR  DV+KCWPF G   + K+Q+   LLPPIT  KF+WW +EL  
Sbjct: 3   AAASQGFSIREYTEKMRVVDVEKCWPFSGGGGD-KEQVEATLLPPITVTKFRWWSHELNK 61

Query: 198 AKKV-----------VLDGKSGFEIPEVVLGSEEVDGMNCPVCLSFSASSVNALKVHV 338
             +             L G S  E  E   G +E++ + CPVC +F+  S+     HV
Sbjct: 62  INQQKEQGQGLEEDHCLIGVSRNEAKEKEEGEDELE-IVCPVCGNFATESMEVFNAHV 118


>ref|XP_003633225.1| PREDICTED: uncharacterized protein LOC100854859 [Vitis vinifera]
          Length = 238

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/71 (45%), Positives = 44/71 (61%)
 Frame = +3

Query: 15  IAIAFEGFSIREYTSNMRTKDVDKCWPFEGNPKELKKQLVEDLLPPITSKKFKWWVNELE 194
           +A+AFEGFSIR+Y   MR+ DV KCWPF+G+    +      LLPP+   KF+WW +E+E
Sbjct: 1   MAVAFEGFSIRDYVWRMRSVDVVKCWPFDGDGHGDESV----LLPPMEVPKFRWWSHEVE 56

Query: 195 SAKKVVLDGKS 227
             +      KS
Sbjct: 57  LLRSAAAQRKS 67


>emb|CAN63610.1| hypothetical protein VITISV_000282 [Vitis vinifera]
          Length = 1138

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/71 (45%), Positives = 44/71 (61%)
 Frame = +3

Query: 15  IAIAFEGFSIREYTSNMRTKDVDKCWPFEGNPKELKKQLVEDLLPPITSKKFKWWVNELE 194
           +A+AFEGFSIR+Y   MR+ DV KCWPF+G+    +      LLPP+   KF+WW +E+E
Sbjct: 1   MAVAFEGFSIRDYVWRMRSVDVVKCWPFDGDGHGDESV----LLPPMEVPKFRWWSHEVE 56

Query: 195 SAKKVVLDGKS 227
             +      KS
Sbjct: 57  LLRSAAAQRKS 67


>ref|XP_003617459.1| hypothetical protein MTR_5g091810 [Medicago truncatula]
           gi|355518794|gb|AET00418.1| hypothetical protein
           MTR_5g091810 [Medicago truncatula]
          Length = 1378

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 41/106 (38%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
 Frame = +3

Query: 27  FEGFSIREYTSNMRTKDVDKCWPF--EGNPKELKKQLVEDLLPPITSKKFKWWVNELESA 200
           F+GFSIREYTS MR+ DV KCWPF    NP   + QL    LPP++    +   N   SA
Sbjct: 5   FDGFSIREYTSKMRSIDVFKCWPFTSTSNPHLTRDQL-HSWLPPMSPCPSRSNQNHQSSA 63

Query: 201 KKVVLDGKSGFEIPEVVLGSEEVDGMNCPVCLSFSASSVNALKVHV 338
           ++     +S      V    +E   M CPVC  F+A+++ A+  H+
Sbjct: 64  QQQFSTIQSSKSDHPVRAEDDEKVEMICPVCREFNAATLTAVNAHI 109


>ref|XP_002876478.1| hypothetical protein ARALYDRAFT_486331 [Arabidopsis lyrata subsp.
           lyrata] gi|297322316|gb|EFH52737.1| hypothetical protein
           ARALYDRAFT_486331 [Arabidopsis lyrata subsp. lyrata]
          Length = 761

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 29/59 (49%), Positives = 39/59 (66%)
 Frame = +3

Query: 21  IAFEGFSIREYTSNMRTKDVDKCWPFEGNPKELKKQLVEDLLPPITSKKFKWWVNELES 197
           + + GFSIREYT  +R+++V KCWPF G+       L +  LPPIT  KF+WW +EL S
Sbjct: 3   VDYGGFSIREYTKKVRSENVRKCWPFAGD-------LFQSFLPPITVSKFRWWSHELAS 54


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