BLASTX nr result

ID: Coptis21_contig00038444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038444
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279783.1| PREDICTED: uncharacterized protein ycf36 [Vi...   108   3e-22
ref|XP_004141315.1| PREDICTED: uncharacterized protein ycf36-lik...   105   4e-21
ref|XP_004157359.1| PREDICTED: uncharacterized protein LOC101226...   104   7e-21
ref|XP_002873532.1| hypothetical protein ARALYDRAFT_350377 [Arab...   104   9e-21
ref|NP_196745.4| uncharacterized protein [Arabidopsis thaliana] ...   104   9e-21

>ref|XP_002279783.1| PREDICTED: uncharacterized protein ycf36 [Vitis vinifera]
          Length = 268

 Score =  108 bits (271), Expect = 3e-22
 Identities = 52/66 (78%), Positives = 58/66 (87%)
 Frame = -3

Query: 200 RLIATGASFAFFIGLPVAWFGVVNPESQPLKCGIGALSSGLFVVTLAVLRMYLGWAYVGN 21
           RL  TG SFA FIGLPVAWFG V P+S+PLK  +GA+SSG+FVVTLAV+RMYLGWAYVGN
Sbjct: 100 RLAVTGVSFALFIGLPVAWFGAVGPDSEPLKRILGAVSSGIFVVTLAVVRMYLGWAYVGN 159

Query: 20  RLLSAT 3
           RLLSAT
Sbjct: 160 RLLSAT 165


>ref|XP_004141315.1| PREDICTED: uncharacterized protein ycf36-like [Cucumis sativus]
          Length = 270

 Score =  105 bits (262), Expect = 4e-21
 Identities = 51/66 (77%), Positives = 56/66 (84%)
 Frame = -3

Query: 200 RLIATGASFAFFIGLPVAWFGVVNPESQPLKCGIGALSSGLFVVTLAVLRMYLGWAYVGN 21
           RL+ATGASFA FIGLPVAWFG V  ES PLK  + A+SSG+  VT+AVLRMYLGWAYVGN
Sbjct: 94  RLVATGASFALFIGLPVAWFGTVGVESDPLKLSLCAVSSGILFVTIAVLRMYLGWAYVGN 153

Query: 20  RLLSAT 3
           RLLSAT
Sbjct: 154 RLLSAT 159


>ref|XP_004157359.1| PREDICTED: uncharacterized protein LOC101226963 [Cucumis sativus]
          Length = 297

 Score =  104 bits (260), Expect = 7e-21
 Identities = 51/66 (77%), Positives = 56/66 (84%)
 Frame = -3

Query: 200 RLIATGASFAFFIGLPVAWFGVVNPESQPLKCGIGALSSGLFVVTLAVLRMYLGWAYVGN 21
           RL+ATGASFA FIGLPVAWFG V  ES PLK  + A+SSG+  VT+AVLRMYLGWAYVGN
Sbjct: 121 RLVATGASFALFIGLPVAWFGTVGVESDPLKRSLCAVSSGILFVTIAVLRMYLGWAYVGN 180

Query: 20  RLLSAT 3
           RLLSAT
Sbjct: 181 RLLSAT 186


>ref|XP_002873532.1| hypothetical protein ARALYDRAFT_350377 [Arabidopsis lyrata subsp.
           lyrata] gi|297319369|gb|EFH49791.1| hypothetical protein
           ARALYDRAFT_350377 [Arabidopsis lyrata subsp. lyrata]
          Length = 265

 Score =  104 bits (259), Expect = 9e-21
 Identities = 50/66 (75%), Positives = 57/66 (86%)
 Frame = -3

Query: 200 RLIATGASFAFFIGLPVAWFGVVNPESQPLKCGIGALSSGLFVVTLAVLRMYLGWAYVGN 21
           RL  TGASFAFF+GLPV+WFG V PE +P+K  + A SSG+FVVTLAV+RMYLGWAYVGN
Sbjct: 95  RLFFTGASFAFFVGLPVSWFGSVGPEYEPVKRILAASSSGIFVVTLAVVRMYLGWAYVGN 154

Query: 20  RLLSAT 3
           RLLSAT
Sbjct: 155 RLLSAT 160


>ref|NP_196745.4| uncharacterized protein [Arabidopsis thaliana]
           gi|209863164|gb|ACI88740.1| At5g11840 [Arabidopsis
           thaliana] gi|332004343|gb|AED91726.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 265

 Score =  104 bits (259), Expect = 9e-21
 Identities = 49/66 (74%), Positives = 57/66 (86%)
 Frame = -3

Query: 200 RLIATGASFAFFIGLPVAWFGVVNPESQPLKCGIGALSSGLFVVTLAVLRMYLGWAYVGN 21
           RL  TGASFAFF+GLPV+WFG + PE +P+K  + A SSG+FVVTLAV+RMYLGWAYVGN
Sbjct: 95  RLFLTGASFAFFVGLPVSWFGSIGPEYEPVKRILAASSSGIFVVTLAVVRMYLGWAYVGN 154

Query: 20  RLLSAT 3
           RLLSAT
Sbjct: 155 RLLSAT 160


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