BLASTX nr result
ID: Coptis21_contig00038414
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00038414 (312 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat... 104 8e-21 emb|CBI36868.3| unnamed protein product [Vitis vinifera] 103 1e-20 dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas] 102 4e-20 ref|XP_002529617.1| pentatricopeptide repeat-containing protein,... 100 1e-19 ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containi... 100 2e-19 >ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein At5g40405-like [Cucumis sativus] Length = 614 Score = 104 bits (259), Expect = 8e-21 Identities = 47/101 (46%), Positives = 73/101 (72%) Frame = +2 Query: 8 QTSLVNFYASCGSVETARLLFDRCPQRDVTSWNALIKGYVRSGRYMDAIRVFRAMQDRVD 187 QT++V+ A CG + AR LFD PQRD SWNA+I GY + G+ +A+ +F+ MQ Sbjct: 179 QTTMVSACAKCGDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQ-MDG 237 Query: 188 IEVDEITLLGVVLACSQLGALEMGRWVHAYIEKSCMEMSMN 310 ++V+E++++ VV AC+ LGAL+ G+W HAYIEK+ ++M++N Sbjct: 238 VKVNEVSMISVVTACTHLGALDQGKWAHAYIEKNKIQMTVN 278 >emb|CBI36868.3| unnamed protein product [Vitis vinifera] Length = 541 Score = 103 bits (257), Expect = 1e-20 Identities = 50/104 (48%), Positives = 72/104 (69%), Gaps = 2/104 (1%) Frame = +2 Query: 2 FIQTSLVNFYASCGSVETARLLFDRCPQRDVTSWNALIKGYVRSGRYMDAIRVFRAMQ-- 175 F+QTSL++ Y+S G V+ AR LF P+R+V SW+ +I GYVR G+Y +A+ +FR MQ Sbjct: 100 FVQTSLISMYSSSGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQML 159 Query: 176 DRVDIEVDEITLLGVVLACSQLGALEMGRWVHAYIEKSCMEMSM 307 D+ +E T+ GV+ AC +LGALE G+W HAYI+K M + + Sbjct: 160 GVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDV 203 >dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas] Length = 563 Score = 102 bits (253), Expect = 4e-20 Identities = 45/102 (44%), Positives = 73/102 (71%) Frame = +2 Query: 2 FIQTSLVNFYASCGSVETARLLFDRCPQRDVTSWNALIKGYVRSGRYMDAIRVFRAMQDR 181 ++Q+SLVNFY+ C + AR +FD +R++ W+A++ GY R G +A+ +FR MQ Sbjct: 128 YVQSSLVNFYSKCEEITIARKVFDEITERNLVCWSAMVSGYARLGMINEALIMFREMQ-V 186 Query: 182 VDIEVDEITLLGVVLACSQLGALEMGRWVHAYIEKSCMEMSM 307 V IE DE++L+GV+ AC+ +GAL++G+WVHAYI+K + + + Sbjct: 187 VGIEPDEVSLVGVLSACAMVGALDIGKWVHAYIKKRMIHVDL 228 Score = 61.2 bits (147), Expect = 8e-08 Identities = 28/86 (32%), Positives = 50/86 (58%) Frame = +2 Query: 5 IQTSLVNFYASCGSVETARLLFDRCPQRDVTSWNALIKGYVRSGRYMDAIRVFRAMQDRV 184 + T+L+N YA CG +E AR +FD +D +W+++I G G DA+ VF M++ Sbjct: 230 LNTALINMYAKCGCIEKAREIFDEMRVKDSKAWSSMIVGLAIHGLAEDALNVFSRMEE-A 288 Query: 185 DIEVDEITLLGVVLACSQLGALEMGR 262 + + +T +G++ AC+ G + G+ Sbjct: 289 QAKPNHVTFIGILSACAHGGLVSDGK 314 >ref|XP_002529617.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223530902|gb|EEF32762.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 438 Score = 100 bits (249), Expect = 1e-19 Identities = 43/102 (42%), Positives = 71/102 (69%) Frame = +2 Query: 2 FIQTSLVNFYASCGSVETARLLFDRCPQRDVTSWNALIKGYVRSGRYMDAIRVFRAMQDR 181 ++Q+SLV+ Y C + A+ +FD +R++ W+A+I GY R G +A+ +FR MQ+ Sbjct: 268 YVQSSLVSLYGKCEEIRLAKQVFDEITERNLVCWSAMISGYARVGMVNEALSMFREMQE- 326 Query: 182 VDIEVDEITLLGVVLACSQLGALEMGRWVHAYIEKSCMEMSM 307 V IE DE++L+GV+ AC+ GAL++GRW+HAYI+K + + + Sbjct: 327 VGIEPDEVSLVGVISACAMAGALDIGRWIHAYIKKRMIHIDL 368 Score = 54.3 bits (129), Expect = 1e-05 Identities = 23/64 (35%), Positives = 39/64 (60%) Frame = +2 Query: 5 IQTSLVNFYASCGSVETARLLFDRCPQRDVTSWNALIKGYVRSGRYMDAIRVFRAMQDRV 184 + T+LVN YA CG +E A+ +FD P +D +W+++I G G DA+ +F M++ Sbjct: 370 LNTALVNMYAKCGCIEKAKEIFDYMPVKDSKAWSSMIVGLAIHGLAEDALEMFSRMEEAK 429 Query: 185 DIEV 196 + E+ Sbjct: 430 ETEI 433 >ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070 [Vitis vinifera] Length = 698 Score = 100 bits (248), Expect = 2e-19 Identities = 45/99 (45%), Positives = 74/99 (74%) Frame = +2 Query: 11 TSLVNFYASCGSVETARLLFDRCPQRDVTSWNALIKGYVRSGRYMDAIRVFRAMQDRVDI 190 TSLV+ YA CG V+TAR LFD+ +RDV +W+A+I GY ++ R +A+ +F MQ + +I Sbjct: 264 TSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQ-KANI 322 Query: 191 EVDEITLLGVVLACSQLGALEMGRWVHAYIEKSCMEMSM 307 + +EIT++ ++ +C+ LGALE G+WVH +I+K M++++ Sbjct: 323 DPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTV 361 Score = 95.5 bits (236), Expect = 4e-18 Identities = 38/95 (40%), Positives = 67/95 (70%) Frame = +2 Query: 2 FIQTSLVNFYASCGSVETARLLFDRCPQRDVTSWNALIKGYVRSGRYMDAIRVFRAMQDR 181 F++ +L++ YA+CG VE AR +FD +R+V +WN++ GY +SG + + +++F M + Sbjct: 160 FVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLE- 218 Query: 182 VDIEVDEITLLGVVLACSQLGALEMGRWVHAYIEK 286 +DI DE+TL+ V+ AC +L LE+G W++ Y+E+ Sbjct: 219 LDIRFDEVTLVSVLTACGRLADLELGEWINRYVEE 253 Score = 68.9 bits (167), Expect = 4e-10 Identities = 32/84 (38%), Positives = 56/84 (66%) Frame = +2 Query: 11 TSLVNFYASCGSVETARLLFDRCPQRDVTSWNALIKGYVRSGRYMDAIRVFRAMQDRVDI 190 T+L++FYA CGSVE++ +F + P ++V SW LI+G +G+ A+ F M ++ ++ Sbjct: 365 TALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEK-NV 423 Query: 191 EVDEITLLGVVLACSQLGALEMGR 262 E +++T +GV+ ACS G ++ GR Sbjct: 424 EPNDVTFIGVLSACSHAGLVDEGR 447