BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038414
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat...   104   8e-21
emb|CBI36868.3| unnamed protein product [Vitis vinifera]              103   1e-20
dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]                          102   4e-20
ref|XP_002529617.1| pentatricopeptide repeat-containing protein,...   100   1e-19
ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19

>ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g40405-like [Cucumis sativus]
          Length = 614

 Score =  104 bits (259), Expect = 8e-21
 Identities = 47/101 (46%), Positives = 73/101 (72%)
 Frame = +2

Query: 8   QTSLVNFYASCGSVETARLLFDRCPQRDVTSWNALIKGYVRSGRYMDAIRVFRAMQDRVD 187
           QT++V+  A CG +  AR LFD  PQRD  SWNA+I GY + G+  +A+ +F+ MQ    
Sbjct: 179 QTTMVSACAKCGDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQ-MDG 237

Query: 188 IEVDEITLLGVVLACSQLGALEMGRWVHAYIEKSCMEMSMN 310
           ++V+E++++ VV AC+ LGAL+ G+W HAYIEK+ ++M++N
Sbjct: 238 VKVNEVSMISVVTACTHLGALDQGKWAHAYIEKNKIQMTVN 278


>emb|CBI36868.3| unnamed protein product [Vitis vinifera]
          Length = 541

 Score =  103 bits (257), Expect = 1e-20
 Identities = 50/104 (48%), Positives = 72/104 (69%), Gaps = 2/104 (1%)
 Frame = +2

Query: 2   FIQTSLVNFYASCGSVETARLLFDRCPQRDVTSWNALIKGYVRSGRYMDAIRVFRAMQ-- 175
           F+QTSL++ Y+S G V+ AR LF   P+R+V SW+ +I GYVR G+Y +A+ +FR MQ  
Sbjct: 100 FVQTSLISMYSSSGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQML 159

Query: 176 DRVDIEVDEITLLGVVLACSQLGALEMGRWVHAYIEKSCMEMSM 307
              D+  +E T+ GV+ AC +LGALE G+W HAYI+K  M + +
Sbjct: 160 GVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDV 203


>dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]
          Length = 563

 Score =  102 bits (253), Expect = 4e-20
 Identities = 45/102 (44%), Positives = 73/102 (71%)
 Frame = +2

Query: 2   FIQTSLVNFYASCGSVETARLLFDRCPQRDVTSWNALIKGYVRSGRYMDAIRVFRAMQDR 181
           ++Q+SLVNFY+ C  +  AR +FD   +R++  W+A++ GY R G   +A+ +FR MQ  
Sbjct: 128 YVQSSLVNFYSKCEEITIARKVFDEITERNLVCWSAMVSGYARLGMINEALIMFREMQ-V 186

Query: 182 VDIEVDEITLLGVVLACSQLGALEMGRWVHAYIEKSCMEMSM 307
           V IE DE++L+GV+ AC+ +GAL++G+WVHAYI+K  + + +
Sbjct: 187 VGIEPDEVSLVGVLSACAMVGALDIGKWVHAYIKKRMIHVDL 228



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/86 (32%), Positives = 50/86 (58%)
 Frame = +2

Query: 5   IQTSLVNFYASCGSVETARLLFDRCPQRDVTSWNALIKGYVRSGRYMDAIRVFRAMQDRV 184
           + T+L+N YA CG +E AR +FD    +D  +W+++I G    G   DA+ VF  M++  
Sbjct: 230 LNTALINMYAKCGCIEKAREIFDEMRVKDSKAWSSMIVGLAIHGLAEDALNVFSRMEE-A 288

Query: 185 DIEVDEITLLGVVLACSQLGALEMGR 262
             + + +T +G++ AC+  G +  G+
Sbjct: 289 QAKPNHVTFIGILSACAHGGLVSDGK 314


>ref|XP_002529617.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530902|gb|EEF32762.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 438

 Score =  100 bits (249), Expect = 1e-19
 Identities = 43/102 (42%), Positives = 71/102 (69%)
 Frame = +2

Query: 2   FIQTSLVNFYASCGSVETARLLFDRCPQRDVTSWNALIKGYVRSGRYMDAIRVFRAMQDR 181
           ++Q+SLV+ Y  C  +  A+ +FD   +R++  W+A+I GY R G   +A+ +FR MQ+ 
Sbjct: 268 YVQSSLVSLYGKCEEIRLAKQVFDEITERNLVCWSAMISGYARVGMVNEALSMFREMQE- 326

Query: 182 VDIEVDEITLLGVVLACSQLGALEMGRWVHAYIEKSCMEMSM 307
           V IE DE++L+GV+ AC+  GAL++GRW+HAYI+K  + + +
Sbjct: 327 VGIEPDEVSLVGVISACAMAGALDIGRWIHAYIKKRMIHIDL 368



 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 23/64 (35%), Positives = 39/64 (60%)
 Frame = +2

Query: 5   IQTSLVNFYASCGSVETARLLFDRCPQRDVTSWNALIKGYVRSGRYMDAIRVFRAMQDRV 184
           + T+LVN YA CG +E A+ +FD  P +D  +W+++I G    G   DA+ +F  M++  
Sbjct: 370 LNTALVNMYAKCGCIEKAKEIFDYMPVKDSKAWSSMIVGLAIHGLAEDALEMFSRMEEAK 429

Query: 185 DIEV 196
           + E+
Sbjct: 430 ETEI 433


>ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 698

 Score =  100 bits (248), Expect = 2e-19
 Identities = 45/99 (45%), Positives = 74/99 (74%)
 Frame = +2

Query: 11  TSLVNFYASCGSVETARLLFDRCPQRDVTSWNALIKGYVRSGRYMDAIRVFRAMQDRVDI 190
           TSLV+ YA CG V+TAR LFD+  +RDV +W+A+I GY ++ R  +A+ +F  MQ + +I
Sbjct: 264 TSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQ-KANI 322

Query: 191 EVDEITLLGVVLACSQLGALEMGRWVHAYIEKSCMEMSM 307
           + +EIT++ ++ +C+ LGALE G+WVH +I+K  M++++
Sbjct: 323 DPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTV 361



 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 38/95 (40%), Positives = 67/95 (70%)
 Frame = +2

Query: 2   FIQTSLVNFYASCGSVETARLLFDRCPQRDVTSWNALIKGYVRSGRYMDAIRVFRAMQDR 181
           F++ +L++ YA+CG VE AR +FD   +R+V +WN++  GY +SG + + +++F  M + 
Sbjct: 160 FVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLE- 218

Query: 182 VDIEVDEITLLGVVLACSQLGALEMGRWVHAYIEK 286
           +DI  DE+TL+ V+ AC +L  LE+G W++ Y+E+
Sbjct: 219 LDIRFDEVTLVSVLTACGRLADLELGEWINRYVEE 253



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/84 (38%), Positives = 56/84 (66%)
 Frame = +2

Query: 11  TSLVNFYASCGSVETARLLFDRCPQRDVTSWNALIKGYVRSGRYMDAIRVFRAMQDRVDI 190
           T+L++FYA CGSVE++  +F + P ++V SW  LI+G   +G+   A+  F  M ++ ++
Sbjct: 365 TALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEK-NV 423

Query: 191 EVDEITLLGVVLACSQLGALEMGR 262
           E +++T +GV+ ACS  G ++ GR
Sbjct: 424 EPNDVTFIGVLSACSHAGLVDEGR 447