BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038408
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC28207.1| T24H24.13 gene product [Arabidopsis thaliana] gi|...    94   1e-17
gb|AAD20433.1| putative retroelement pol polyprotein [Arabidopsi...    93   3e-17
emb|CAN69144.1| hypothetical protein VITISV_027771 [Vitis vinifera]    82   3e-14
emb|CAN69591.1| hypothetical protein VITISV_001704 [Vitis vinifera]    82   6e-14
gb|ABW81181.1| gag-pol20 [Arabidopsis cebennensis]                     81   8e-14

>gb|AAC28207.1| T24H24.13 gene product [Arabidopsis thaliana]
           gi|7267161|emb|CAB77873.1| putative transposon protein
           [Arabidopsis thaliana]
          Length = 681

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 43/89 (48%), Positives = 60/89 (67%)
 Frame = +2

Query: 2   GSSADVLYYNAFKQLKIPDSEMAATHSHLYGFSGDKAHAIGEVQLPVATGPVTLIINFVV 181
           GSS DVL+Y+AFK++   DSE+    + L GF+GD   ++G +QLP     V  + +F+V
Sbjct: 558 GSSVDVLFYDAFKRMGHLDSELQGRKTPLTGFAGDTTFSLGTIQLPTIARGVRRLTSFLV 617

Query: 182 VKADTPYHMILGRTWLHRLRAVPSTYHQC 268
           V    P++ ILGR WLH ++AVPSTYHQC
Sbjct: 618 VNKKAPFNAILGRPWLHAMKAVPSTYHQC 646


>gb|AAD20433.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 889

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 44/89 (49%), Positives = 59/89 (66%)
 Frame = +2

Query: 2   GSSADVLYYNAFKQLKIPDSEMAATHSHLYGFSGDKAHAIGEVQLPVATGPVTLIINFVV 181
           GSS DVL+Y+AFK+    DS++    + L GF+GD   +IG +QLP     V  + NF+V
Sbjct: 84  GSSVDVLFYDAFKRTGHLDSKLQGRKTPLTGFAGDTTFSIGTIQLPTIARGVRQLTNFLV 143

Query: 182 VKADTPYHMILGRTWLHRLRAVPSTYHQC 268
           V    P++ ILGR WLH ++AVPSTYHQC
Sbjct: 144 VDKKAPFNAILGRPWLHVMKAVPSTYHQC 172


>emb|CAN69144.1| hypothetical protein VITISV_027771 [Vitis vinifera]
          Length = 635

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 41/88 (46%), Positives = 55/88 (62%)
 Frame = +2

Query: 2   GSSADVLYYNAFKQLKIPDSEMAATHSHLYGFSGDKAHAIGEVQLPVATGPVTLIINFVV 181
           GSSAD+L     KQ+    S +      L+GF+G    ++G+V LPV  GPV L   F V
Sbjct: 500 GSSADLLQVAVIKQMGFIPSSLENPERTLFGFNGSSTTSLGDVTLPVQAGPVILNALFSV 559

Query: 182 VKADTPYHMILGRTWLHRLRAVPSTYHQ 265
           V+  +P++ ILGRTWLH ++ VPSTYHQ
Sbjct: 560 VEDLSPFNAILGRTWLHGMKVVPSTYHQ 587


>emb|CAN69591.1| hypothetical protein VITISV_001704 [Vitis vinifera]
          Length = 429

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 40/88 (45%), Positives = 58/88 (65%)
 Frame = +2

Query: 2   GSSADVLYYNAFKQLKIPDSEMAATHSHLYGFSGDKAHAIGEVQLPVATGPVTLIINFVV 181
           GSSAD+L  +A KQ+ +  S +      L GF+G    ++G+V L V  GP+ L + F V
Sbjct: 294 GSSADLLQVSAIKQMGLVPSSLENMRWILSGFNGATITSLGDVVLSVQAGPIILNVQFSV 353

Query: 182 VKADTPYHMILGRTWLHRLRAVPSTYHQ 265
           V+  +P++ ILGRTWLH ++A+PSTYHQ
Sbjct: 354 VEDLSPFNAILGRTWLHYMKAIPSTYHQ 381


>gb|ABW81181.1| gag-pol20 [Arabidopsis cebennensis]
          Length = 498

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 36/89 (40%), Positives = 58/89 (65%)
 Frame = +2

Query: 2   GSSADVLYYNAFKQLKIPDSEMAATHSHLYGFSGDKAHAIGEVQLPVATGPVTLIINFVV 181
           GS+ DV++    +Q+KI  S ++ T   + GFSG++   +G +QLPV  G +T I++F+V
Sbjct: 26  GSTIDVIFRKTLRQMKIDISRVSPTPRPVLGFSGERLMTLGTIQLPVRAGGITKIVDFLV 85

Query: 182 VKADTPYHMILGRTWLHRLRAVPSTYHQC 268
               T Y++I+G  WL+ +RA+ STYH C
Sbjct: 86  TDQPTIYNVIMGTPWLNLMRAIASTYHLC 114