BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038381
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAH20429.1| AT3G06240 [Arabidopsis thaliana]                       57   2e-06
gb|AAF30317.1|AC018907_17 hypothetical protein [Arabidopsis thal...    57   2e-06
ref|NP_566277.2| F-box/kelch-repeat protein [Arabidopsis thalian...    57   2e-06
ref|XP_002882457.1| F-box family protein [Arabidopsis lyrata sub...    55   5e-06

>dbj|BAH20429.1| AT3G06240 [Arabidopsis thaliana]
          Length = 241

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
 Frame = +2

Query: 38  SGMFLNGAIHWIEKSKNKYCETLISFSIKEKEF*EFSSPMDEYDFT------TVGVLGGE 199
           SG+  NGAIHW+          +++F I+ +EF E   P +  D +       VG L G 
Sbjct: 81  SGVHFNGAIHWVFTESRHNQRVVVAFDIQTEEFREMPVPDEAEDCSHRFSNFVVGSLNGR 140

Query: 200 ICVLCKTYGIDLDIWVMKNYG 262
           +CV+   Y +  DIWVM  YG
Sbjct: 141 LCVVNSCYDVHDDIWVMSEYG 161


>gb|AAF30317.1|AC018907_17 hypothetical protein [Arabidopsis thaliana]
           gi|21536665|gb|AAM60997.1| unknown [Arabidopsis
           thaliana]
          Length = 416

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
 Frame = +2

Query: 38  SGMFLNGAIHWIEKSKNKYCETLISFSIKEKEF*EFSSPMDEYDFT------TVGVLGGE 199
           SG+  NGAIHW+          +++F I+ +EF E   P +  D +       VG L G 
Sbjct: 256 SGVHFNGAIHWVFTESRHNQRVVVAFDIQTEEFREMPVPDEAEDCSHRFSNFVVGSLNGR 315

Query: 200 ICVLCKTYGIDLDIWVMKNYG 262
           +CV+   Y +  DIWVM  YG
Sbjct: 316 LCVVNSCYDVHDDIWVMSEYG 336


>ref|NP_566277.2| F-box/kelch-repeat protein [Arabidopsis thaliana]
           gi|75151183|sp|Q8GXC7.1|FBK50_ARATH RecName:
           Full=F-box/kelch-repeat protein At3g06240
           gi|26451648|dbj|BAC42921.1| unknown protein [Arabidopsis
           thaliana] gi|29824145|gb|AAP04033.1| putative F-box
           protein family [Arabidopsis thaliana]
           gi|332640843|gb|AEE74364.1| F-box/kelch-repeat protein
           [Arabidopsis thaliana]
          Length = 427

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
 Frame = +2

Query: 38  SGMFLNGAIHWIEKSKNKYCETLISFSIKEKEF*EFSSPMDEYDFT------TVGVLGGE 199
           SG+  NGAIHW+          +++F I+ +EF E   P +  D +       VG L G 
Sbjct: 267 SGVHFNGAIHWVFTESRHNQRVVVAFDIQTEEFREMPVPDEAEDCSHRFSNFVVGSLNGR 326

Query: 200 ICVLCKTYGIDLDIWVMKNYG 262
           +CV+   Y +  DIWVM  YG
Sbjct: 327 LCVVNSCYDVHDDIWVMSEYG 347


>ref|XP_002882457.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297328297|gb|EFH58716.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 427

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
 Frame = +2

Query: 38  SGMFLNGAIHWIEKSKNKYCETLISFSIKEKEF*EFSSPMDEYDF------TTVGVLGGE 199
           SG+  NGAIHW+    +     +++F I+ +EF E   P++  D         VG L G 
Sbjct: 267 SGVHFNGAIHWVFAEISHGQRVVVAFDIQTEEFREMPLPVEAEDCHHRFSNFVVGSLNGR 326

Query: 200 ICVLCKTYGIDLDIWVMKNYG 262
           +CV+   Y +  DIWVM  YG
Sbjct: 327 LCVVNSCYEVHDDIWVMSEYG 347