BLASTX nr result
ID: Coptis21_contig00038350
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00038350 (220 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003530952.1| PREDICTED: eukaryotic translation initiation... 120 1e-25 ref|XP_002531589.1| Eukaryotic translation initiation factor 3 s... 120 1e-25 ref|XP_003521511.1| PREDICTED: eukaryotic translation initiation... 119 2e-25 ref|XP_003525194.1| PREDICTED: eukaryotic translation initiation... 117 1e-24 ref|XP_002306956.1| predicted protein [Populus trichocarpa] gi|2... 116 2e-24 >ref|XP_003530952.1| PREDICTED: eukaryotic translation initiation factor 3 subunit C-like [Glycine max] Length = 926 Score = 120 bits (301), Expect = 1e-25 Identities = 54/72 (75%), Positives = 66/72 (91%) Frame = +3 Query: 3 PAQKLKILFSVVSALFDVNPSPNGHMSVNIWKKCVQNMLVILDILGQYPNIVVDETVQPE 182 PAQKL+ILFSVVSA FDVNP NGHM +N+WKKCVQNML+ILDIL QYPNI+VD++V+P+ Sbjct: 287 PAQKLEILFSVVSAQFDVNPGLNGHMPINVWKKCVQNMLIILDILVQYPNIMVDDSVEPD 346 Query: 183 KNETKKGIEYNG 218 +NET+KG E+NG Sbjct: 347 ENETQKGAEHNG 358 >ref|XP_002531589.1| Eukaryotic translation initiation factor 3 subunit, putative [Ricinus communis] gi|223528785|gb|EEF30792.1| Eukaryotic translation initiation factor 3 subunit, putative [Ricinus communis] Length = 619 Score = 120 bits (300), Expect = 1e-25 Identities = 54/72 (75%), Positives = 66/72 (91%) Frame = +3 Query: 3 PAQKLKILFSVVSALFDVNPSPNGHMSVNIWKKCVQNMLVILDILGQYPNIVVDETVQPE 182 PAQKL+ILFSVVSA FDVNP +GHM +N+WKKCVQNMLVILDIL QYPNIVVD+ V+P+ Sbjct: 286 PAQKLEILFSVVSAQFDVNPGLSGHMPINVWKKCVQNMLVILDILVQYPNIVVDDMVEPD 345 Query: 183 KNETKKGIEYNG 218 +NE++KG++YNG Sbjct: 346 ENESQKGVDYNG 357 >ref|XP_003521511.1| PREDICTED: eukaryotic translation initiation factor 3 subunit C-like [Glycine max] Length = 926 Score = 119 bits (299), Expect = 2e-25 Identities = 54/71 (76%), Positives = 66/71 (92%) Frame = +3 Query: 6 AQKLKILFSVVSALFDVNPSPNGHMSVNIWKKCVQNMLVILDILGQYPNIVVDETVQPEK 185 AQKL+ILFSVVSA FDVNP NGHM +N+WKKCVQNMLVILDIL Q+PNIVVD++V+P++ Sbjct: 285 AQKLEILFSVVSAQFDVNPGLNGHMPINVWKKCVQNMLVILDILVQHPNIVVDDSVEPDE 344 Query: 186 NETKKGIEYNG 218 NET+KG++YNG Sbjct: 345 NETQKGVDYNG 355 >ref|XP_003525194.1| PREDICTED: eukaryotic translation initiation factor 3 subunit C-like [Glycine max] Length = 925 Score = 117 bits (292), Expect = 1e-24 Identities = 53/72 (73%), Positives = 64/72 (88%) Frame = +3 Query: 3 PAQKLKILFSVVSALFDVNPSPNGHMSVNIWKKCVQNMLVILDILGQYPNIVVDETVQPE 182 PAQKL+ILFSVVSA FDVNP NGH+ +N+WKKCVQNML+ILDIL QYPNIV D+ V+P+ Sbjct: 286 PAQKLEILFSVVSAQFDVNPGLNGHVPINVWKKCVQNMLIILDILVQYPNIVADDLVEPD 345 Query: 183 KNETKKGIEYNG 218 +NET+KG E+NG Sbjct: 346 ENETQKGPEHNG 357 >ref|XP_002306956.1| predicted protein [Populus trichocarpa] gi|222856405|gb|EEE93952.1| predicted protein [Populus trichocarpa] Length = 897 Score = 116 bits (291), Expect = 2e-24 Identities = 53/72 (73%), Positives = 65/72 (90%) Frame = +3 Query: 3 PAQKLKILFSVVSALFDVNPSPNGHMSVNIWKKCVQNMLVILDILGQYPNIVVDETVQPE 182 PAQKL+ILFSVVSA FDVNP +GHM +++WK CVQNMLVILDIL QYPNIVVD+TV+P+ Sbjct: 282 PAQKLEILFSVVSAQFDVNPGLSGHMPIHVWKNCVQNMLVILDILVQYPNIVVDDTVEPD 341 Query: 183 KNETKKGIEYNG 218 +NET+KG ++NG Sbjct: 342 ENETQKGADHNG 353